Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MZ820089Gordonia phage ChisanaKitsune8865760.032GordoniaGroup I ChidieberevirusChidieberevirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia rubripertincta NRRL B-16540High-qualityHigh-quality99.830AAI-based (high-confidence) ChidieberevirusChidieberevirus chisanakitsuneCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ820088Streptomyces phage Katalie5127165.587StreptomycesGroup I LikavirusLikavirusArquatrovirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptomyces lividans JI 1326High-qualityHigh-quality100.000AAI-based (high-confidence) LikavirusLikavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateimmunity orf_28;integrase orf_48
MZ820087Arthrobacter phage Niobe4360266.657ArthrobacterGroup I YangvirusYangvirusUnclassifiedCasidaviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Arthrobacter globiformis B-2979High-qualityHigh-quality100.000AAI-based (high-confidence) YangvirusYangvirus eleziCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ820084Microbacterium phage KatChan4034963.005MicrobacteriumGroup I NeferthenavirusNeferthenavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Microbacterium foliorum NRRL B-24224High-qualityHigh-quality99.860AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MZ820083Microbacterium phage Doobus4119566.256MicrobacteriumGroup I DismasvirusDismasvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Microbacterium foliorum NRRL B-24224High-qualityHigh-quality98.970AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancelytic
MZ818790Vibrio phage OPA177589748.879VibrioGroup I MardecavirusMardecavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio campbellii HY01Not-determinedGenome-fragment New_genusNew_speciesNo hits were found with the default settingslytic
MZ803112Synechococcus T7-like virus S-TIP284574952.449SynechococcusGroup I TiranvirusTiranvirusUnclassifiedUnclassifiedAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Synechococcus sp. CC9605High-qualityHigh-quality100.000AAI-based (high-confidence) TiranvirusTiranvirus STIP28Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_13
MZ779063Staphylococcus phage vB_SauM-UFV_DC426318525.029StaphylococcusGroup I MadawaskavirusMadawaskavirusWallmarkvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureus UFV2030RH1High-qualityHigh-quality98.770AAI-based (high-confidence) MadawaskavirusMadawaskavirus DC4Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ779062Klebsiella phage pJN2-2610995248.999KlebsiellaGroup I WestmeadvirusWestmeadvirusSantaclaravirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria horseHigh-qualityHigh-quality100.000AAI-based (high-confidence) WestmeadvirusWestmeadvirus pJN226The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
MZ773939Pseudomonas phage PP9W4798561.744PseudomonasGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa P9WHigh-qualityHigh-quality98.130AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_71
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