Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PX432479Nostoc phage A-Lf147056136.977NostocGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Nostoc sp. PCC 7120 (= FACHB-418)High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PX432177Mycobacterium phage FSL16116961.397MycobacteriumUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) CheoctovirusCheoctovirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_46;immunity orf_48;antirepressor orf_49
PX425757Enterobacter phage EbcMMA15013246.032EnterobacterUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Enterobacter cloacaeCompleteHigh-quality100.000DTR (high-confidence) SeunavirusSeunavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
PX424303Acinetobacter phage HA_GH10117737.487AcinetobacterUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Acinetobacter baumannii AB-ZAJM6High-qualityHigh-quality97.440AAI-based (high-confidence) SaclayvirusSaclayvirus TAC1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX423614Escherichia phage KN327721442.214EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coliHigh-qualityHigh-quality100.000AAI-based (high-confidence) SuseptimavirusSuseptimavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
PX421546Streptomyces phage Galidraan4362560.403StreptomycesUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Streptomyces galbus DSM 40089Medium-qualityGenome-fragment87.310AAI-based (high-confidence) ScapunavirusScapunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX421545Streptomyces phage Jaresh10790946.894StreptomycesUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Streptomyces griseus DSM 40236Medium-qualityGenome-fragment80.950AAI-based (high-confidence) TomasvirusTomasvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX421544Streptomyces phage Ando1391550.801StreptomycesUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Streptomyces griseus DSM 40236Medium-qualityGenome-fragment56.740AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PX421543Streptomyces phage AndoPrime13171349.438StreptomycesUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Streptomyces griseus DSM 40236CompleteHigh-quality100.000DTR (high-confidence) SamistivirusSamistivirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX421542Streptomyces phage Tatooine13251846.932StreptomycesUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Streptomyces griseus DSM 40236CompleteHigh-quality100.000DTR (high-confidence) GilsonvirusGilsonvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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