INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_020876 | Mycobacterium phage First | 53028 | 63.425 | Mycobacterium | Group I | Fromanvirus | Fromanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | parA orf_32;immunity orf_72 | |||
| NC_020875 | Synechococcus phage S-SSM4 | 182801 | 39.393 | Synechococcus | Group I | Greenvirus | Greenvirus | Unclassified | Kyanoviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Synechococcus sp. WH8018 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_020874 | Prochlorococcus phage P-SSP3 | 46198 | 37.941 | Prochlorococcus | Group I | Tritonvirus | Tritonvirus | Sechaudvirinae | Unclassified | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Prochlorococcus marinus MIT9312 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_44 | |||
| NC_020873 | Bacillus phage vB_BceM_Bc431v3 | 158621 | 39.978 | Bacillus | Group I | Caeruleovirus | Caeruleovirus | Bastillevirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus cereus | High-quality | High-quality | 99.300 | AAI-based (high-confidence) | lytic | ||||
| NC_020872 | Cyanophage SS120-1 | 46997 | 40.492 | Prochlorococcus | Group I | Banchanvirus | Banchanvirus | Unclassified | Unclassified | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Prochlorococcus marinus SS120 | Complete | High-quality | 100.000 | DTR (high-confidence) | temperate | integrase orf_3 | |||
| NC_020871 | Listeria phage vB_LmoM_AG20 | 133057 | 35.933 | Listeria | Group I | Pecentumvirus | Pecentumvirus | Jasinskavirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Listeria monocytogenes CRIFS culture collection code: C519 | High-quality | High-quality | 96.390 | AAI-based (high-confidence) | lytic | ||||
| NC_020870 | Leuconostoc phage LN04 | 25865 | 36.598 | Leuconostoc | Group I | Limdunavirus | Limdunavirus | Mccleskeyvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Leuconostoc pseudomesenteroides LN02 | High-quality | High-quality | 96.310 | AAI-based (high-confidence) | lytic | ||||
| NC_020868 | Vibrio phage VBP32 | 76718 | 42.483 | Vibrio | Group I | Stoningtonvirus | Stoningtonvirus | Fuhrmanvirinae | Schitoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio parahaemolyticus RIMD2210633 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_020867 | Synechococcus phage S-RIP1 | 44892 | 42.930 | Synechococcus | Group I | Kajamvirus | Kajamvirus | Unclassified | Unclassified | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Synechococcus sp. WH8101 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_020866 | Rhodovulum phage RS1 | 40231 | 62.119 | Rhodovulum | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Rhodovulum sp. P122A | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_7 |