INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PZ860450 | Klebsiella phage vB_KpnM_Jabberwock_ER84 | 106479 | 44.751 | Klebsiella | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Klebsiella pneumoniae | High-quality | High-quality | 91.430 | AAI-based (high-confidence) | lytic | ||||
| PZ860449 | Klebsiella phage vB_KpnM_SlithyTove_ER42 | 110204 | 44.529 | Klebsiella | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Klebsiella pneumoniae | High-quality | High-quality | 94.630 | AAI-based (high-confidence) | lytic | ||||
| PZ860268 | Sinorhizobium phage vB_SmeP_3T | 42006 | 60.020 | Sinorhizobium | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Sinorhizobium meliloti RmP3498 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_52 | |||
| PZ858964 | Pseudomonas phage PFM2 | 53042 | 57.187 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas fluorescens ATCC 35858 | High-quality | High-quality | 99.890 | AAI-based (high-confidence) | lytic | ||||
| PZ858695 | Cereibacter phage phiPR-RP1 | 53529 | 52.796 | Cereibacter | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Cereibacter sphaeroides 7001 | High-quality | High-quality | 98.440 | AAI-based (medium-confidence) | lytic | ||||
| PZ843918 | Streptomyces phage Park1214 | 115727 | 52.938 | Streptomyces | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Streptomyces lividans JI 1326 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| PZ843917 | Gordonia phage Wisp | 49621 | 67.314 | Gordonia | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Gordonia terrae CAG3 | High-quality | High-quality | 97.850 | AAI-based (high-confidence) | temperate | integrase orf_32;antirepressor orf_40 | |||
| PZ843916 | Streptomyces phage SunkenRoot | 49218 | 65.651 | Streptomyces | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Streptomyces lividans NRRL B-12275 | High-quality | High-quality | 99.450 | AAI-based (high-confidence) | temperate | immunity orf_30;integrase orf_50 | |||
| PZ843915 | Mycobacterium phage ShortQueendom | 49094 | 63.629 | Mycobacterium | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 94.530 | AAI-based (high-confidence) | temperate | immunity orf_66 | |||
| PZ843914 | Arthrobacter phage Rooter | 39141 | 63.910 | Arthrobacter | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Arthrobacter globiformis B-2979 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_27 |