INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_026611 | Edwardsiella phage GF-2 | 43129 | 51.269 | Edwardsiella | Group I | Gofduovirus | Gofduovirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | antirepressor orf_22;integrase orf_33;antirepressor orf_59 | |||
| NC_026610 | Vibrio phage VpKK5 | 56637 | 51.318 | Vibrio | Group I | Queuovirinae | Unclassified | Queuovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio parahaemolyticus | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_026609 | Lactobacillus phage Ldl1 | 74806 | 37.763 | Lactobacillus | Group I | Lidleunavirus | Lidleunavirus | Tybeckvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactobacillus delbrueckii subsp. lactis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_35;antirepressor orf_67;antirepressor orf_69;antirepressor orf_78;antirepressor orf_79;antirepressor orf_80;antirepressor orf_81 | |||
| NC_026608 | Paracoccus phage vB_PmaS-R3 | 42093 | 56.368 | Paracoccus | Group I | Zhuquevirus | Zhuquevirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Paracoccus marcusii JL-65 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_026607 | Salmonella phage STP4-a | 159914 | 36.862 | Salmonella | Group I | Gelderlandvirus | Gelderlandvirus | Tevenvirinae | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella Typhimurium ATCC 14028 | High-quality | High-quality | 95.190 | AAI-based (high-confidence) | lytic | ||||
| NC_026606 | Arthrobacter phage vB_ArtM-ArV1 | 71200 | 61.621 | Arthrobacter | Group I | Klausavirus | Klausavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Arthrobacter sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_026605 | Mycobacterium phage Malithi | 46869 | 67.093 | Mycobacterium | Group I | Fishburnevirus | Fishburnevirus | Pclasvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 95.660 | AAI-based (high-confidence) | temperate | integrase orf_30;antirepressor orf_33 | |||
| NC_026604 | Mycobacterium phage Cerasum | 53636 | 61.494 | Mycobacterium | Group I | Cheoctovirus | Cheoctovirus | Gracegardnervirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 93.130 | AAI-based (high-confidence) | temperate | integrase orf_36;immunity orf_38;antirepressor orf_40 | |||
| NC_026603 | Mycobacterium phage Keshu | 61251 | 67.254 | Mycobacterium | Group I | Keshuvirus | Keshuvirus | Weiservirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 99.890 | AAI-based (high-confidence) | temperate | integrase orf_43;immunity orf_46 | |||
| NC_026602 | Pseudomonas phage vB_PaeP_PAO1_Ab05 | 43639 | 62.346 | Pseudomonas | Group I | Phikmvvirus | Phikmvvirus | Krylovirinae | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic |