INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_028982 | Bacillus phage JL | 137918 | 40.802 | Bacillus | Group I | Siminovitchvirus | Siminovitchvirus | Spounavirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus cereus | High-quality | High-quality | 99.440 | AAI-based (high-confidence) | lytic | ||||
| NC_028980 | Pseudomonas phage PAE1 | 62181 | 64.233 | Pseudomonas | Group I | Yuavirus | Yuavirus | Rabinowitzvirinae | Mesyanzhinovviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa strain PAO9505 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_028979 | Mycobacterium phage Cheetobro | 57253 | 67.967 | Mycobacterium | Group I | Fionnbharthvirus | Fionnbharthvirus | Weiservirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 99.450 | AAI-based (high-confidence) | temperate | integrase orf_44;immunity orf_46;cro orf_47 | |||
| NC_028978 | Mycobacterium phage Murucutumbu | 60609 | 66.693 | Mycobacterium | Group I | Anayavirus | Anayavirus | Weiservirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 99.040 | AAI-based (high-confidence) | temperate | integrase orf_41;immunity orf_43 | |||
| NC_028977 | Klebsiella phage vB_KpnP_KpV289 | 41054 | 52.565 | Klebsiella | Group I | Przondovirus | Przondovirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_028976 | Streptomyces phage Izzy | 50113 | 65.911 | Streptomyces | Group I | Likavirus | Likavirus | Arquatrovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptomyces griseus ATCC 10137 | High-quality | High-quality | 98.850 | AAI-based (high-confidence) | temperate | immunity orf_28;integrase orf_46 | |||
| NC_028974 | Streptomyces phage YDN12 | 56528 | 69.210 | Streptomyces | Group I | Woodruffvirus | Woodruffvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptomyces griseus subsp. griseus ATCC 10137 | High-quality | High-quality | 97.040 | AAI-based (high-confidence) | lytic | ||||
| NC_028972 | Gordonia phage Gmala1 | 75167 | 50.798 | Gordonia | Group I | Gordtnkvirus | Gordtnkvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia sp. | High-quality | High-quality | 98.550 | AAI-based (high-confidence) | temperate | integrase orf_62 | |||
| NC_028971 | Pseudomonas phage DL68 | 66111 | 55.724 | Pseudomonas | Group I | Pbunavirus | Pbunavirus | Unclassified | Lindbergviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa PAO1 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_028969 | Brevibacillus phage Osiris | 52955 | 38.102 | Brevibacillus | Group I | Jimmervirus | Jimmervirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Brevibacillus laterosporus | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | antirepressor orf_20;antirepressor orf_71 |