INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_031922 | Synechococcus phage S-CAM9 | 174830 | 39.046 | Synechococcus | Group I | Kanaloavirus | Kanaloavirus | Unclassified | Kyanoviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Synechococcus sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_031921 | Flavobacterium phage Fpv5 | 42696 | 32.008 | Flavobacterium | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Flavobacterium psychrophilum 950106-1/1 | High-quality | High-quality | 99.540 | AAI-based (high-confidence) | lytic | ||||
| NC_031920 | Streptococcus phage phiARI0004 | 41105 | 40.659 | Streptococcus | Group I | Hinxtonvirus | Hinxtonvirus | Ferrettivirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus pneumoniae 08B01757 | High-quality | High-quality | 99.190 | AAI-based (high-confidence) | lytic | ||||
| NC_031919 | Flavobacterium phage Fpv8 | 42696 | 32.008 | Flavobacterium | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Flavobacterium psychrophilum 950106-1/1 | High-quality | High-quality | 99.540 | AAI-based (high-confidence) | lytic | ||||
| NC_031918 | Salmonella phage 64795_sal3 | 45342 | 45.596 | Salmonella | Group I | Saltrevirus | Saltrevirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. Typhimurium | High-quality | High-quality | 96.590 | AAI-based (high-confidence) | lytic | ||||
| NC_031917 | Pseudoalteromonas phage BS5 | 39949 | 40.597 | Pseudoalteromonas | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudoalteromonas atlantica | Complete | High-quality | 100.000 | DTR (high-confidence) | temperate | cro orf_45 | |||
| NC_031915 | Streptococcus phage phiARI0468-4 | 37395 | 38.131 | Streptococcus | Group I | Paclarkvirus | Paclarkvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus pneumoniae 09B10874 | High-quality | High-quality | 96.800 | AAI-based (high-confidence) | temperate | antirepressor orf_48;integrase orf_53 | |||
| NC_031914 | Flavobacterium phage Fpv1 | 88994 | 26.992 | Flavobacterium | Group I | Fipvunavirus | Fipvunavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Flavobacterium psychrophilum 950106-1/1 | High-quality | High-quality | 98.540 | AAI-based (high-confidence) | lytic | ||||
| NC_031913 | Streptococcus phage phiARI0460-1 | 41807 | 39.690 | Streptococcus | Group I | Spinunavirus | Spinunavirus | Ferrettivirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus pneumoniae 08B03577 | High-quality | High-quality | 99.240 | AAI-based (high-confidence) | temperate | cro orf_55;cro orf_61;integrase orf_64 | |||
| NC_031912 | Flavobacterium phage Fpv20 | 89937 | 26.944 | Flavobacterium | Group I | Fipvunavirus | Fipvunavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Flavobacterium psychrophilum 950106-1/1 | High-quality | High-quality | 99.590 | AAI-based (high-confidence) | lytic |