INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_047802 | Pectobacterium phage PP99 | 44609 | 45.545 | Pectobacterium | Group I | Gajwadongvirus | Gajwadongvirus | Unclassified | Unclassified | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pectobacterium carotovorum subsp. carotovorum PB29 | High-quality | High-quality | 99.080 | AAI-based (high-confidence) | lytic | ||||
| NC_047801 | Pectobacterium phage PP47 | 40995 | 48.889 | Pectobacterium | Group I | Pektosvirus | Pektosvirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pectobacterium carotovorum subsp. carotovorum PB38 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_047800 | Ralstonia phage phiAp1 | 44793 | 60.967 | Ralstonia | Group I | Ayakvirus | Ayakvirus | Unclassified | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Ralstonia solanacearum | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_047799 | Klebsiella phage K5-4 | 40163 | 53.136 | Klebsiella | Group I | Przondovirus | Przondovirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae NTUH-K44 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_047798 | Klebsiella phage K5-2 | 41116 | 53.342 | Klebsiella | Group I | Przondovirus | Przondovirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae subsp. ozaenae K5 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_047797 | Pectobacterium phage PP81 | 40751 | 48.917 | Pectobacterium | Group I | Pektosvirus | Pektosvirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pectobacterium carotovorum subsp. carotovorum PB38 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_047796 | Enterococcus phage EFP01 | 155053 | 37.018 | Enterococcus | Group I | Schiekvirus | Schiekvirus | Brockvirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Enterococcus faecium | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_047795 | Streptomyces phage Raleigh | 40785 | 71.801 | Streptomyces | Group I | Raleighvirus | Raleighvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptomyces griseus ATCC 10137 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_28;cro orf_31 | |||
| NC_047794 | Streptomyces phage Picard | 39522 | 72.605 | Streptomyces | Group I | Picardvirus | Picardvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptomyces venezuelae ATCC 10712 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_29;immunity orf_31;cro orf_32 | |||
| NC_047793 | Streptomyces phage PapayaSalad | 38411 | 72.635 | Streptomyces | Group I | Austintatiousvirus | Austintatiousvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptomyces venezuelae ATCC 10712 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_28;cro orf_31;integrase orf_47 |