INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_048053 | Dickeya phage vB_DsoM_JA29 | 253323 | 43.843 | Dickeya | Group I | Salmondvirus | Salmondvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Dickeya solani MK10 | High-quality | High-quality | 99.510 | AAI-based (high-confidence) | temperate | integrase orf_309 | |||
| NC_048052 | Dickeya phage vB_DsoP_JA10 | 40131 | 51.451 | Dickeya | Group I | Ningirsuvirus | Ningirsuvirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Dickeya solani MK10 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_048049 | Synechococcus phage S-T4 | 181082 | 38.927 | Synechococcus | Group I | Tamkungvirus | Tamkungvirus | Unclassified | Kyanoviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Synechococcus sp. WH7803 | High-quality | High-quality | 94.840 | AAI-based (medium-confidence) | lytic | ||||
| NC_048048 | Caulobacter phage CcrSC | 317489 | 64.183 | Caulobacter | Group I | Bertelyvirus | Bertelyvirus | Unclassified | Jeanschmidtviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Caulobacter vibrioides CB15 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_048047 | Caulobacter phage CcrBL9 | 322272 | 63.679 | Caulobacter | Group I | Bertelyvirus | Bertelyvirus | Unclassified | Jeanschmidtviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Caulobacter vibrioides CB15 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_048046 | Caulobacter phage CcrPW | 308141 | 62.242 | Caulobacter | Group I | Colossusvirus | Colossusvirus | Unclassified | Jeanschmidtviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Caulobacter vibrioides CB15 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_193 | |||
| NC_048045 | Caulobacter phage CcrBL10 | 220934 | 65.687 | Caulobacter | Group I | Poindextervirus | Poindextervirus | Unclassified | Jeanschmidtviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Caulobacter vibrioides CB15 | Complete | High-quality | 100.000 | DTR (high-confidence) | temperate | integrase orf_140 | |||
| NC_048044 | Klebsiella phage NJR15 | 49468 | 51.043 | Klebsiella | Group I | Webervirus | Webervirus | Unclassified | Drexlerviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_048043 | Klebsiella phage NJS2 | 50132 | 50.786 | Klebsiella | Group I | Webervirus | Webervirus | Unclassified | Drexlerviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_048042 | Klebsiella phage TAH8 | 49344 | 51.092 | Klebsiella | Group I | Webervirus | Webervirus | Unclassified | Drexlerviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae | High-quality | High-quality | 99.590 | AAI-based (high-confidence) | lytic |