INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_049816 | Escherichia phage tunus | 51111 | 44.799 | Escherichia | Group I | Warwickvirus | Warwickvirus | Tempevirinae | Drexlerviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli K-12 subsr. MG1655 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_049815 | Escherichia phage tonn | 51012 | 44.472 | Escherichia | Group I | Warwickvirus | Warwickvirus | Tempevirinae | Drexlerviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli K-12 subsr. MG1655 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_049814 | Shigella phage JK16 | 51854 | 44.546 | Shigella | Group I | Warwickvirus | Warwickvirus | Tempevirinae | Drexlerviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli DH5alpha | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_049813 | Escherichia phage vB_EcoS-12210I | 44219 | 44.413 | Escherichia | Group I | Veterinaerplatzvirus | Veterinaerplatzvirus | Braunvirinae | Drexlerviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli DSM 12242 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_049812 | Lactococcus phage P1045 | 31050 | 36.135 | Lactococcus | Group I | Vedamuthuvirus | Vedamuthuvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactococcus lactis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | cro orf_2;antirepressor orf_3;antirepressor orf_7 | |||
| NC_049811 | Lactococcus phage 62503 | 30556 | 36.320 | Lactococcus | Group I | Vedamuthuvirus | Vedamuthuvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactococcus lactis | High-quality | High-quality | 99.870 | AAI-based (high-confidence) | temperate | cro orf_2;antirepressor orf_3;antirepressor orf_5;antirepressor orf_7 | |||
| NC_049810 | Lactococcus phage 50902 | 30745 | 36.045 | Lactococcus | Group I | Vedamuthuvirus | Vedamuthuvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactococcus lactis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | cro orf_2;antirepressor orf_4 | |||
| NC_049809 | Lactococcus phage Q33 | 31106 | 36.215 | Lactococcus | Group I | Vedamuthuvirus | Vedamuthuvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactococcus lactis P335 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | cro orf_2;antirepressor orf_4 | |||
| NC_049808 | Lactococcus phage P596 | 57909 | 34.364 | Lactococcus | Group I | Teubervirus | Teubervirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactococcus lactis | High-quality | High-quality | 96.360 | AAI-based (high-confidence) | temperate | integrase orf_40 | |||
| NC_049807 | Lactococcus phage AM6 | 62054 | 34.246 | Lactococcus | Group I | Teubervirus | Teubervirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactococcus lactis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_47 |