INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_054894 | Escherichia phage Henu7 | 49526 | 48.205 | Escherichia | Group I | Henuseptimavirus | Henuseptimavirus | Tempevirinae | Drexlerviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli DH5 | High-quality | High-quality | 98.250 | AAI-based (high-confidence) | lytic | ||||
| NC_054893 | Escherichia phage vB_EcoS_W011D | 49847 | 46.241 | Escherichia | Group I | Changchunvirus | Changchunvirus | Tempevirinae | Drexlerviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_054892 | Escherichia phage vB_EcoS_PHB17 | 48939 | 46.897 | Escherichia | Group I | Baihuvirus | Baihuvirus | Tempevirinae | Drexlerviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli | High-quality | High-quality | 97.120 | AAI-based (high-confidence) | lytic | ||||
| NC_054891 | Ralstonia phage Anchaing | 43597 | 63.087 | Ralstonia | Group I | Anchaingvirus | Anchaingvirus | Unclassified | Autonotataviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Ralstonia pseudosolanacearum I-31 (MT043) | Complete | High-quality | 100.000 | DTR (high-confidence) | temperate | integrase orf_10 | |||
| NC_054890 | Pseudomonas phage vB_PsyP_3MF5 | 41608 | 56.528 | Pseudomonas | Group I | Warsawvirus | Warsawvirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas syringae isolate 3M | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_054889 | Enterococcus phage vb_GEC_Ef_S_9 | 33631 | 36.056 | Enterococcus | Group I | Amiranvirus | Amiranvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Enterococcus faecium | Medium-quality | Genome-fragment | 79.580 | AAI-based (high-confidence) | lytic | ||||
| NC_054815 | Mycobacterium phage Phaded | 53598 | 63.118 | Mycobacterium | Group I | Pukovnikvirus | Pukovnikvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_34;antirepressor orf_65;immunity orf_69 | |||
| NC_054814 | Mycobacterium phage IronMan | 53467 | 63.316 | Mycobacterium | Group I | Pukovnikvirus | Pukovnikvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_33;antirepressor orf_65;immunity orf_69 | |||
| NC_054813 | Mycobacterium phage Malec | 53377 | 63.647 | Mycobacterium | Group I | Turbidovirus | Turbidovirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_34;immunity orf_69 | |||
| NC_054812 | Mycobacterium phage JoshKayV | 53366 | 63.003 | Mycobacterium | Group I | Turbidovirus | Turbidovirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_33;immunity orf_73 |