INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_061443 | Erwinia phage pEa_SNUABM_2 | 265442 | 49.379 | Erwinia | Group I | Alexandravirus | Alexandravirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia amylovora | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_061442 | Erwinia phage pEa_SNUABM_35 | 261719 | 49.167 | Erwinia | Group I | Alexandravirus | Alexandravirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia amylovora | High-quality | High-quality | 98.770 | AAI-based (high-confidence) | temperate | integrase orf_204 | |||
| NC_061441 | Erwinia phage pEa_SNUABM_16 | 266838 | 49.580 | Erwinia | Group I | Alexandravirus | Alexandravirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia amylovora | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_333 | |||
| NC_061440 | Erwinia phage pEa_SNUABM_22 | 265146 | 49.569 | Erwinia | Group I | Alexandravirus | Alexandravirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia amylovora | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_334 | |||
| NC_061439 | Pseudomonas phage vB_PaeS_PcyII-40_PfII40a | 37033 | 64.343 | Pseudomonas | Group I | Casadabanvirus | Casadabanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 97.390 | AAI-based (high-confidence) | temperate | cro orf_1 | |||
| NC_061438 | Pseudomonas phage F_ET309sp/Pa1651 | 37414 | 64.366 | Pseudomonas | Group I | Casadabanvirus | Casadabanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 97.980 | AAI-based (high-confidence) | temperate | cro orf_1;integrase orf_5 | |||
| NC_061437 | Pseudomonas phage vB_PaeS_PAO1_HW12 | 37496 | 64.268 | Pseudomonas | Group I | Casadabanvirus | Casadabanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 98.280 | AAI-based (high-confidence) | temperate | cro orf_1;integrase orf_5 | |||
| NC_061436 | Pseudomonas phage AIIMS-Pa-B1 | 37578 | 64.570 | Pseudomonas | Group I | Casadabanvirus | Casadabanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa clinical isolate | High-quality | High-quality | 98.500 | AAI-based (high-confidence) | temperate | cro orf_56 | |||
| NC_061435 | Pseudomonas phage JBD26 | 37840 | 64.115 | Pseudomonas | Group I | Casadabanvirus | Casadabanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 98.850 | AAI-based (high-confidence) | temperate | cro orf_1;integrase orf_5 | |||
| NC_061434 | Pseudomonas phage YMC12/01/R960 | 37011 | 64.546 | Pseudomonas | Group I | Casadabanvirus | Casadabanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa YMC12/01/R960 | High-quality | High-quality | 96.580 | AAI-based (high-confidence) | temperate | cro orf_1;integrase orf_5 |