INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_070929 | Streptococcus phage IPP52 | 36805 | 38.150 | Streptococcus | Group I | Paclarkvirus | Paclarkvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus pneumoniae 34/3 | High-quality | High-quality | 95.110 | AAI-based (high-confidence) | temperate | integrase orf_1 | |||
| NC_070928 | Streptococcus phage IPP48 | 37848 | 38.528 | Streptococcus | Group I | Paclarkvirus | Paclarkvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus pneumoniae ST556 | High-quality | High-quality | 97.820 | AAI-based (high-confidence) | temperate | integrase orf_1;cro orf_4;cro orf_5;antirepressor orf_6 | |||
| NC_070927 | Streptococcus phage SpGS-1 | 37631 | 38.280 | Streptococcus | Group I | Paclarkvirus | Paclarkvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus pneumoniae Rx1 | High-quality | High-quality | 97.330 | AAI-based (high-confidence) | temperate | integrase orf_1;cro orf_4;cro orf_5;antirepressor orf_6 | |||
| NC_070926 | Streptococcus phage IPP39 | 37761 | 38.362 | Streptococcus | Group I | Paclarkvirus | Paclarkvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus pneumoniae 19A | High-quality | High-quality | 97.600 | AAI-based (high-confidence) | temperate | integrase orf_1;antirepressor orf_5 | |||
| NC_070925 | Streptococcus phage IPP14 | 37252 | 38.441 | Streptococcus | Group I | Paclarkvirus | Paclarkvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus pneumoniae SA42 | High-quality | High-quality | 96.240 | AAI-based (high-confidence) | temperate | integrase orf_1;cro orf_4;cro orf_5;antirepressor orf_6 | |||
| NC_070924 | Streptococcus phage IPP55 | 37847 | 38.706 | Streptococcus | Group I | Paclarkvirus | Paclarkvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus pneumoniae 47A/1 | High-quality | High-quality | 97.800 | AAI-based (high-confidence) | temperate | integrase orf_1;antirepressor orf_6 | |||
| NC_070923 | Streptococcus phage IPP54 | 38900 | 38.375 | Streptococcus | Group I | Paclarkvirus | Paclarkvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus pneumoniae 32F/2 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_1;cro orf_4;cro orf_5;antirepressor orf_6 | |||
| NC_070922 | Streptococcus phage IPP65 | 39046 | 38.514 | Streptococcus | Group I | Paclarkvirus | Paclarkvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus pneumoniae 24B/2 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_1;antirepressor orf_6 | |||
| NC_070921 | Erwinia phage Pavtok | 61401 | 61.983 | Erwinia | Group I | Pavtokvirus | Pavtokvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia amylovora | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_32 | |||
| NC_070920 | Shewanella phage vB_SspM_M16-3 | 40166 | 46.798 | Shewanella | Group I | Arsenicumvirus | Arsenicumvirus | Unclassified | Peduoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Shewanella sp. M16 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_61 |