INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_073035 | Xanthomonas phage vB_Xar_IVIA-DoCa6 | 62951 | 66.977 | Xanthomonas | Group I | Bosavirus | Bosavirus | Bradleyvirinae | Mesyanzhinovviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Xanthomonas arboricola pv. juglandis IVIA 1317-1a | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_073034 | Stenotrophomonas phage vB_SmaS-AXL_1 | 63962 | 67.277 | Stenotrophomonas | Group I | Bosavirus | Bosavirus | Bradleyvirinae | Mesyanzhinovviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Stenotrophomonas maltophilia D1585 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_073033 | Xanthomonas phage Xp12 | 63783 | 68.170 | Xanthomonas | Group I | Bosavirus | Bosavirus | Bradleyvirinae | Mesyanzhinovviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Xanthomonas oryzae | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_073032 | Xanthomonas phage FMYAK-P1 | 64088 | 67.776 | Xanthomonas | Group I | Bosavirus | Bosavirus | Bradleyvirinae | Mesyanzhinovviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Xanthomonas sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_073031 | Janthinobacterium phage vB_JliS-Donnerlittchen | 58220 | 67.752 | Janthinobacterium | Group I | Donnerlittchenvirus | Donnerlittchenvirus | Bradleyvirinae | Mesyanzhinovviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Janthinobacterium lividum EIF1 | High-quality | High-quality | 94.790 | AAI-based (high-confidence) | lytic | ||||
| NC_073030 | Xanthomonas phage Mallos | 59242 | 61.838 | Xanthomonas | Group I | Mallosvirus | Mallosvirus | Bradleyvirinae | Mesyanzhinovviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Xanthomonas translucens pv. translucens (DSM 18974) | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_073029 | Xanthomonas phage Elanor | 62341 | 64.535 | Xanthomonas | Group I | Elanorvirus | Elanorvirus | Bradleyvirinae | Mesyanzhinovviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Xanthomonas translucens pv. translucens (DSM 18974) | High-quality | High-quality | 99.540 | AAI-based (high-confidence) | temperate | integrase orf_12 | |||
| NC_073028 | Stenotrophomonas phage vB_Sm_QDWS359 | 61862 | 67.415 | Stenotrophomonas | Group I | Xooduovirus | Xooduovirus | Bradleyvirinae | Mesyanzhinovviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Stenotrophomonas maltophilia SM102 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_073027 | Stenotrophomonas phage A1432 | 61660 | 61.922 | Stenotrophomonas | Group I | Ghuizhouvirus | Ghuizhouvirus | Bradleyvirinae | Mesyanzhinovviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Stenotrophomonas maltophilia YCR3A-1 | High-quality | High-quality | 99.750 | AAI-based (high-confidence) | lytic | ||||
| NC_073026 | Xanthomonas phage vB_Xar_IVIA-DoCa5 | 56408 | 59.614 | Xanthomonas | Group I | Docaquintavirus | Docaquintavirus | Bradleyvirinae | Mesyanzhinovviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Xanthomonas arboricola pv. juglandis IVIA 1317-1a | High-quality | High-quality | 91.600 | AAI-based (high-confidence) | temperate | integrase orf_4 |