INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_107625 | Clostridium phage vB_CpeP_PM11 | 17894 | 28.166 | Clostridium | Group I | Gregsiragusavirus | Gregsiragusavirus | Denniswatsonvirinae | Guelinviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Clostridium perfringens | High-quality | High-quality | 96.790 | AAI-based (high-confidence) | lytic | ||||
| NC_107482 | Enterococcus phage vB_Efm_LG62 | 42236 | 35.209 | Enterococcus | Group I | Efemunavirus | Efemunavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Enterococcus faecium 2111230062 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_107481 | Bacillus phage B13 | 36864 | 34.831 | Bacillus | Group I | Bunatrivirus | Bunatrivirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus cereus VKM B-13 | High-quality | High-quality | 91.670 | AAI-based (high-confidence) | temperate | integrase orf_27;antirepressor orf_33 | |||
| NC_107196 | Plectonema phage JingP1 | 40797 | 52.254 | Plectonema | Group I | Morrisvirus | Morrisvirus | Unclassified | Saffermanviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Plectonema sp. | High-quality | High-quality | 99.660 | AAI-based (high-confidence) | lytic | ||||
| NC_107033 | Salmonella phage JN-S202001 | 111256 | 40.014 | Salmonella | Group I | Epseptimavirus | Epseptimavirus | Markadamsvirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella sp. | High-quality | High-quality | 98.360 | AAI-based (high-confidence) | lytic | ||||
| NC_107026 | Burkholderia phage Carl1 | 37492 | 64.606 | Burkholderia | Group I | Kisquinquevirus | Kisquinquevirus | Unclassified | Peduoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Burkholderia cenocepacia Van1 | Complete | High-quality | 100.000 | DTR (high-confidence) | temperate | integrase orf_49 | |||
| NC_107013 | Escherichia phage vB_EcoS-UTI89UKE1 | 41265 | 50.951 | Escherichia | Group I | Kagunavirus | Kagunavirus | Guernseyvirinae | Sarkviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_106924 | Escherichia phage A51.2 | 137300 | 43.575 | Escherichia | Group I | Vequintavirus | Vequintavirus | Vequintavirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli LF82 | High-quality | High-quality | 97.880 | AAI-based (high-confidence) | lytic | ||||
| NC_106835 | Listeria phage HB17054 | 42079 | 36.721 | Listeria | Group I | Aquingentivirus | Aquingentivirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Listeria monocytogenes ATCC 19115 | Complete | High-quality | 100.000 | DTR (high-confidence) | temperate | integrase orf_25;cro orf_30;antirepressor orf_39 | |||
| NC_106733 | Salmonella phage GRNsp8 | 111357 | 39.920 | Salmonella | Group I | Epseptimavirus | Epseptimavirus | Markadamsvirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella sp. | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic |