INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OK247671 | Clostridium phage vB_CpeS_BG3P | 48528 | 28.398 | Clostridium | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Clostridium perfringens | Complete | High-quality | 100.000 | DTR (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OK216879 | Gordonia phage AnarQue | 61822 | 68.806 | Gordonia | Group I | Westmeadvirus | Westmeadvirus | Santaclaravirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia rubripertincta NRRL B-16540 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Mossrosevirus | Mossrosevirus mossrose | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| OK210077 | Serratia phage KKP_3264 | 148182 | 37.509 | Serratia | Group I | Justusliebigvirus | Justusliebigvirus | Stephanstirmvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Serratia fonticola KKP3084 | High-quality | High-quality | 98.040 | AAI-based (high-confidence) | Justusliebigvirus | Justusliebigvirus KKP3264 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OK210074 | Enterobacter phage KKP_3263 | 39418 | 51.142 | Enterobacter | Group I | Kayfunavirus | Kayfunavirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Enterobacter ludwigii KKP 3083 | High-quality | High-quality | 99.090 | AAI-based (high-confidence) | Kayfunavirus | Kayfunavirus KKP3263 | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| OK181169 | Vibrio phage 536 | 12676 | 41.464 | Vibrio | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio parahaemolyticus | Low-quality | Genome-fragment | 14.130 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OK173051 | Streptococcus phage SF39 | 41257 | 39.877 | Streptococcus | Group I | Spinunavirus | Spinunavirus | Ferrettivirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus pneumoniae | High-quality | High-quality | 98.610 | AAI-based (high-confidence) | Spinunavirus | Spinunavirus SF39 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | cro orf_55;integrase orf_59 |
| OK172329 | Alcaligenes phage vB_Af_QDWS535 | 50121 | 47.962 | Alcaligenes | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Alcaligenes faecalis 10106 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OK169616 | Salmonella phage SGPC | 42345 | 50.058 | Salmonella | Group I | Jerseyvirus | Jerseyvirus | Guernseyvirinae | Sarkviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica serovar Gallinarum SG18 | High-quality | High-quality | 98.750 | AAI-based (high-confidence) | Jerseyvirus | Jerseyvirus SGPC | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OK149216 | Acinetobacter phage vB_IME_Ab2712 | 74579 | 43.302 | Acinetobacter | Group I | Schitoviridae | Unclassified | Unclassified | Schitoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Acinetobacter baumannii | Complete | High-quality | 100.000 | DTR (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | parA orf_47 |
| OK149215 | Klebsiella phage vB_KpnP_IME305 | 38641 | 50.943 | Klebsiella | Group I | Teetrevirus | Teetrevirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae | High-quality | High-quality | 96.810 | AAI-based (high-confidence) | Teetrevirus | Teetrevirus IME305 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic |