INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OK428602 | Vibrio phage BX-1 | 144654 | 41.893 | Vibrio | Group I | Vapseptimavirus | Vapseptimavirus | Unclassified | Ackermannviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio alginolyticus AF-1 | High-quality | High-quality | 98.620 | AAI-based (high-confidence) | Vapseptimavirus | Vapseptimavirus VAP7 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OK428535 | Escherichia phage vB_EcoM_Lh1B | 240200 | 48.323 | Escherichia | Group I | Seoulvirus | Seoulvirus | Unclassified | Chimalliviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli | High-quality | High-quality | 98.280 | AAI-based (high-confidence) | Seoulvirus | Seoulvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OK412919 | Streptomyces phage Pablito | 49492 | 66.411 | Streptomyces | Group I | Janusvirus | Janusvirus | Arquatrovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptomyces lividans | High-quality | High-quality | 97.320 | AAI-based (high-confidence) | Janusvirus | Janusvirus pablito | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | immunity orf_29 |
| OK381870 | Vibrio phage D4 | 82960 | 47.424 | Vibrio | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio harveyi strain VH2 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OK357457 | Salmonella phage YMFM0293 | 41957 | 50.209 | Salmonella | Group I | Jerseyvirus | Jerseyvirus | Guernseyvirinae | Sarkviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella sp. | High-quality | High-quality | 97.940 | AAI-based (high-confidence) | Jerseyvirus | Jerseyvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OK349510 | Bacillus phage BM-P1 | 153087 | 41.936 | Bacillus | Group I | Grisebachstrassevirus | Grisebachstrassevirus | Bastillevirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus sp. | High-quality | High-quality | 96.900 | AAI-based (high-confidence) | Grisebachstrassevirus | Grisebachstrassevirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OK349507 | Vibrio phage vB_VpaS_AL-2 | 58457 | 46.364 | Vibrio | Group I | Queuovirinae | Unclassified | Queuovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio parahaemolyticus M0904 | Medium-quality | Genome-fragment | 55.070 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OK349506 | Vibrio phage vB_VpaP_AL-1 | 42854 | 49.109 | Vibrio | Group I | Maculvirus | Maculvirus | Unclassified | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio parahaemolyticus M2413 | Complete | High-quality | 100.000 | DTR (high-confidence) | Maculvirus | Maculvirus SrVc9 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OK340822 | Flavobacterium phage FpV4-1.3 | 88308 | 27.216 | Flavobacterium | Group I | Fipvunavirus | Fipvunavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Flavobacterium psychrophilum 020612-2/1 | High-quality | High-quality | 97.700 | AAI-based (high-confidence) | Fipvunavirus | Fipvunavirus Fpv4 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OK340821 | Flavobacterium phage FpV4-1.2 | 88308 | 27.216 | Flavobacterium | Group I | Fipvunavirus | Fipvunavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Flavobacterium psychrophilum 020612-2/1 | High-quality | High-quality | 97.700 | AAI-based (high-confidence) | Fipvunavirus | Fipvunavirus Fpv4 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic |