INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OK499984	Escherichia phage vB_EcoD_Mishu	49713	42.868	Escherichia	Group I	Tlsvirus	Tlsvirus	Tempevirinae	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia Coli	High-quality	High-quality	98.610	AAI-based (high-confidence)	Tlsvirus	Tlsvirus mishy	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_79
OK499983	Bacillus phage vB_BanH_McCartney	158334	39.893	Bacillus	Group I	Tsarbombavirus	Tsarbombavirus	Bastillevirinae	Herelleviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus anthracis Sterne	High-quality	High-quality	99.450	AAI-based (high-confidence)	Tsarbombavirus	Tsarbombavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OK499982	Morganella phage vB_MmoP_Lilpapawes	39168	47.064	Morganella	Group I	Minipunavirus	Minipunavirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Morganella morganii	High-quality	High-quality	100.000	AAI-based (high-confidence)	Minipunavirus	Minipunavirus lilpapawes	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OK499981	Klebsiella phage vB_KaeM_Merci	165052	39.306	Klebsiella	Group I	Jiaodavirus	Jiaodavirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella aerogenes	High-quality	High-quality	97.730	AAI-based (high-confidence)	Jiaodavirus	Jiaodavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OK499980	Klebsiella phage vB_KaeM_LilPanda	164872	39.548	Klebsiella	Group I	Jiaodavirus	Jiaodavirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella aerogenes	High-quality	High-quality	97.700	AAI-based (high-confidence)	Jiaodavirus	Jiaodavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OK499979	Bacillus Phage vB_BanS_McSteamy	39748	34.933	Bacillus	Group I	Wbetavirus	Wbetavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus anthracis Sterne	High-quality	High-quality	100.000	AAI-based (high-confidence)	Wbetavirus	Wbetavirus mcsteamy	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_26
OK499978	Klebsiella phage vB_KpnM_JustaPhage	48129	48.594	Klebsiella	Group I	Sircambvirus	Sircambvirus	Jameshumphriesvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumonaie	High-quality	High-quality	99.150	AAI-based (high-confidence)	Sircambvirus	Sircambvirus justaphage	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OK499977	Bacillus phage vB_BanH_Emiliahah	158566	39.914	Bacillus	Group I	Tsarbombavirus	Tsarbombavirus	Bastillevirinae	Herelleviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus anthracis Sterne	High-quality	High-quality	99.590	AAI-based (high-confidence)	Tsarbombavirus	Tsarbombavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OK499976	Bacillus phage vB_BanH_JarJar	161711	37.811	Bacillus	Group I	Bequatrovirus	Bequatrovirus	Bastillevirinae	Herelleviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus anthracis Sterne	High-quality	High-quality	98.590	AAI-based (high-confidence)	Bequatrovirus	Bequatrovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OK499975	Proteus phage vB_PmiS_Jing313	58534	46.877	Proteus	Group I	Lavrentievavirus	Lavrentievavirus	Unclassified	Casjensviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Proteus mirabilis	High-quality	High-quality	98.260	AAI-based (high-confidence)	Lavrentievavirus	Lavrentievavirus pPM01	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic