Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
OL615012Shigella phage vB_SboM_Phaginator16664735.456ShigellaGroup I TequatrovirusTequatrovirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Shigella boydiiHigh-qualityHigh-quality99.110AAI-based (high-confidence) TequatrovirusTequatrovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OL615011Shigella phage vB_SboS_Gloob15867650.359ShigellaGroup I AgtrevirusAgtrevirusAglimvirinaeAckermannviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Shigella boydiiHigh-qualityHigh-quality100.000AAI-based (high-confidence) AgtrevirusAgtrevirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
OL615010Shigella phage vB_SboD_StarDew4471554.682ShigellaGroup I DhillonvirusDhillonvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Shigella boydiiHigh-qualityHigh-quality99.980AAI-based (high-confidence) DhillonvirusDhillonvirus stardewCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OL614104Morganella phage Mecenats668619349.065MorganellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Morganella sp.High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
OL606627Klebsiella phage vB_KaeS_Phraden5905256.550KlebsiellaGroup I ChivirusChivirusUnclassifiedCasjensviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella aerogenesHigh-qualityHigh-quality91.600AAI-based (high-confidence) ChivirusChivirus SeWh1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_60
OL604152Klebsiella phage vB_KpnS-Carvaje5685845.675KlebsiellaGroup I CarvajevirusCarvajevirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality99.590AAI-based (high-confidence) CarvajevirusCarvajevirus carvajeThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
OL581612Pseudomonas phage Eisa94073059.236PseudomonasGroup I PollyceevirusPollyceevirusUnclassifiedAutonotataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas syringae pv. tomato str. DC3000High-qualityHigh-quality99.090AAI-based (high-confidence) PollyceevirusPollyceevirus Eisa9The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
OL581611Pseudomonas phage Eir44017757.284PseudomonasGroup I GhunavirusGhunavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas syringae pv. tomato str. DC3000High-qualityHigh-quality98.810AAI-based (high-confidence) GhunavirusGhunavirus AH05Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OL580764Bacillus phage vB_BsuS-Goe1412549035.541BacillusGroup I SpbetavirusSpbetavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus subtilisHigh-qualityHigh-quality98.660AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_28;antirepressor orf_92
OL551674Enterobacter phage vB_EcRAM-0117847744.985EnterobacterGroup I PseudotevenvirusPseudotevenvirusUnclassifiedStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterobacter cloacae complexHigh-qualityHigh-quality100.000AAI-based (high-confidence) PseudotevenvirusPseudotevenvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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