INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OL674249	Klebsiella phage KpS4	49674	50.161	Klebsiella	Group I	Webervirus	Webervirus	Unclassified	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae	High-quality	High-quality	100.000	AAI-based (high-confidence)	Webervirus	Webervirus KpS4	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OL658619	Oceanospirillum phage vB_OsaM_PD0307	44421	57.131	Oceanospirillum	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Oceanospirillum sanctuarii	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
OL657228	Escherichia phage 21	42931	50.798	Escherichia	Group I	Jouyvirus	Jouyvirus	Jacobvirinae	Zimmerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	94.960	AAI-based (high-confidence)	Jouyvirus	Jouyvirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_31;cro orf_48;antirepressor orf_49
OL657226	Escherichia phage 434	47993	50.199	Escherichia	Group I	Alegriavirus	Alegriavirus	Jacobvirinae	Zimmerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	100.000	AAI-based (high-confidence)	Alegriavirus	Alegriavirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_27;cro orf_43;antirepressor orf_44
OL656110	Escherichia phage vB_EcoM-RPN242	154840	48.831	Escherichia	Group I	Aglimvirinae	Unclassified	Aglimvirinae	Ackermannviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli strain M242	High-quality	High-quality	98.010	AAI-based (high-confidence)	Agtrevirus	Agtrevirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OL656108	Salmonella phage UAB_69	87060	38.907	Salmonella	Group I	Felixounavirus	Felixounavirus	Ounavirinae	Andersonviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica serovar Typhimurium strain LB5000	High-quality	High-quality	98.870	AAI-based (high-confidence)	Felixounavirus	Felixounavirus UAB87	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OL656107	Salmonella phage UAB_60	167356	35.398	Salmonella	Group I	Tequatrovirus	Tequatrovirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica serovar Enteritidis str. LK5	High-quality	High-quality	99.500	AAI-based (high-confidence)	Tequatrovirus	Tequatrovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OL656106	Salmonella phage UAB_1	147769	37.436	Salmonella	Group I	Justusliebigvirus	Justusliebigvirus	Stephanstirmvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica serovar Typhimurium strain LB5000	Complete	High-quality	100.000	DTR (high-confidence)	Justusliebigvirus	Justusliebigvirus UAB1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OL656105	Rhodococcus phage P19	17065	55.429	Rhodococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Rhodococcus globerulus ATCC 25714	Complete	High-quality	100.000	ITR (high-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
OL652658	Salmonella phage JD02	43955	49.532	Salmonella	Group I	Jerseyvirus	Jerseyvirus	Guernseyvirinae	Sarkviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica serovar Enteritidis	Complete	High-quality	100.000	DTR (high-confidence)	Jerseyvirus	Jerseyvirus JD01	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic