Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
OM291373Salmonella phage PBSE1914133249.903SalmonellaGroup I JerseyvirusJerseyvirusGuernseyvirinaeSarkviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar Enteritidis ATCC 13076CompleteHigh-quality100.000DTR (high-confidence) JerseyvirusJerseyvirus PBSE191Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OM287554Alteromonas phage vB_AmaS-R9Y14085155.061AlteromonasGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Alteromonas macleodii ATCC 27126High-qualityHigh-quality96.840AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
OM284015Elizabethkingia phage EKP13889051.342ElizabethkingiaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Elizabethkingia anophelisHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_27;cro orf_41;integrase orf_61
OM283127Burkholderia phage JC16118265.436BurkholderiaGroup I LessievirusLessievirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Burkholderia cenocepacia Van1High-qualityHigh-quality98.190AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancelytic
OM282085Pseudomonas phage P4134065856.186PseudomonasGroup I GhunavirusGhunavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas savastanoi pv. glycinea CFBP 2214High-qualityHigh-quality99.880AAI-based (high-confidence) HennigervirusHennigervirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
OM272052Escherichia phage fBC-Eco014346650.352EscherichiaGroup I KagunavirusKagunavirusGuernseyvirinaeSarkviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancelytic
OM262541Escherichia phage vB_EcoS_Zar3M4590153.709EscherichiaGroup I DhillonvirusDhillonvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliHigh-qualityHigh-quality100.000AAI-based (high-confidence) DhillonvirusDhillonvirus Zar3MCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OM262540Dhillonvirus Lh4520454.528UnspecifiedGroup I DhillonvirusDhillonvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliHigh-qualityHigh-quality100.000AAI-based (high-confidence) DhillonvirusDhillonvirus LhCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OM258170Escherichia phage ZL194788444.549EscherichiaGroup I RtpvirusRtpvirusBraunvirinaeDrexlerviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli BL21High-qualityHigh-quality100.000AAI-based (high-confidence) RtpvirusRtpvirus ZL19The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateantirepressor orf_36
OM256482Providencia phage EPr24126150.185ProvidenciaGroup I KayfunavirusKayfunavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Providencia rettgeri MRSN 845308CompleteHigh-quality100.000DTR (high-confidence) KayfunavirusKayfunavirus EPr2The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
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