INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OM803178 | Phage ELT4 | 165114 | 40.524 | Unspecified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unspecified | High-quality | High-quality | 99.090 | AAI-based (high-confidence) | Krischvirus | Krischvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OM799543 | Vibrio phage OY1 | 43479 | 49.267 | Vibrio | Group I | Maculvirus | Maculvirus | Unclassified | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Maculvirus | Maculvirus HA5 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OM793623 | Mycobacterium phage Maco6 | 47144 | 58.627 | Mycobacterium | Group I | Mapvirus | Mapvirus | Alphabravovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacteroides abscessus | High-quality | High-quality | 97.750 | AAI-based (high-confidence) | Mapvirus | Mapvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OM782678 | Vibrio phage PC-Liy1 | 246348 | 42.601 | Vibrio | Group I | Schizotequatrovirus | Schizotequatrovirus | Unclassified | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio sp. | High-quality | High-quality | 91.580 | AAI-based (high-confidence) | Schizotequatrovirus | Schizotequatrovirus KVP40 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OM782452 | Pseudomonas phage vB_PaeP_TUMS_P10 | 74200 | 53.466 | Pseudomonas | Group I | Luzseptimavirus | Luzseptimavirus | Migulavirinae | Schitoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa ATCC 27853 | Complete | High-quality | 100.000 | DTR (high-confidence) | Luzseptimavirus | Luzseptimavirus KPP21 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OM782324 | Ascunsovirus oldenburgi | 5581 | 52.912 | Unspecified | Group II | Ascunsovirus | Ascunsovirus | Unclassified | Tainaviridae | Secretvirales | Microviricetes | Phixviricota | Sangervirae | Floreoviria | Sulfitobacter sp. SH24-1b | High-quality | High-quality | 100.000 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | unknown | |
| OM747534 | Halorubrum pleomorphic virus 13 | 9333 | 57.066 | Halorubrum | Group II | Betapleolipovirus | Betapleolipovirus | Unclassified | Pleolipoviridae | Haloruvirales | Huolimaviricetes | Saleviricota | Trapavirae | Floreoviria | Halorubrum sp. K2 | Medium-quality | Genome-fragment | 84.310 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OM743306 | Bacillus phage vB_BcgM | 160441 | 37.771 | Bacillus | Group I | Bequatrovirus | Bequatrovirus | Bastillevirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus mycoides MC118 | Complete | High-quality | 100.000 | DTR (high-confidence) | Bequatrovirus | Bequatrovirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OM735690 | Stenotrophomonas phage vB_SmeS_BUCT705 | 50665 | 50.678 | Stenotrophomonas | Group I | Webervirus | Webervirus | Unclassified | Drexlerviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Stenotrophomonas maltophilia | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Webervirus | Webervirus BUCT705 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OM735689 | Stenotrophomonas phage vB_SmeS_BUCT704 | 34535 | 37.559 | Stenotrophomonas | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Stenotrophomonas maltophilia | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | antirepressor orf_27 |