Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
OM868077Synechococcus phage Yong-M4-2511132153.582SynechococcusGroup II InoviridaeUnclassifiedUnclassifiedInoviridaeTubulaviralesFaserviricetesHofneiviricotaLoebviraeFloreoviria Synechococcus sp. PCC 7002Low-qualityGenome-fragment46.550HMM-based (lower-bound) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_6
OM868076Synechococcus phage Yong-M3-2324513962.813SynechococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Synechococcus sp. PCC 7002High-qualityHigh-quality99.180AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_38
OM868075Hafnia phage yong36282345.351HafniaGroup I SeuratvirusSeuratvirusQueuovirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Hafnia paralveiCompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
OM867676Salmonella phage PRF-SP23987450.291SalmonellaGroup I KayfunavirusKayfunavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar Paratyphi BCompleteHigh-quality100.000DTR (high-confidence) KayfunavirusKayfunavirus PRFSP1The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
OM867527Escherichia phage GN077012042.842EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coliCompleteHigh-quality100.000DTR (high-confidence) GamaleyavirusGamaleyavirus Hk2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OM867526Escherichia phage GN0610723739.205EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coliCompleteHigh-quality100.000DTR (high-confidence) TequintavirusTequintavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
OM867525Vibrio phage vB_VruC_PG211001844.300VibrioUnclassified RumoivirusRumoivirusUnclassifiedAsemoviridaeVinaviralesBelvinaviricetesProdugelaviricotaAbadenaviraeVaridnaviria Vibrio rumoiensis FERM P-14531Low-qualityGenome-fragment26.900HMM-based (lower-bound) RumoivirusRumoivirus VruCCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OM864357Escherichia phage ZH54294951.405EscherichiaGroup I DrulisvirusDrulisvirusSlopekvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliCompleteHigh-quality100.000DTR (high-confidence) DrulisvirusDrulisvirus ZH5Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OM858838Shigella phage B27102839.745ShigellaGroup I IthacavirusIthacavirusHumphriesvirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Shigella flexneriHigh-qualityHigh-quality99.810AAI-based (high-confidence) IthacavirusIthacavirus B2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OM850392Staphylococcus phage B2-10214241930.709StaphylococcusGroup I TwortvirinaeUnclassifiedTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureusHigh-qualityHigh-quality100.000AAI-based (high-confidence) KayvirusKayvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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