INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
ON529852	Brevundimonas phage vB_BpoS-Kabachok	356285	65.528	Brevundimonas	Group I	Marchewkavirus	Marchewkavirus	Unclassified	Jeanschmidtviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Brevundimonas pondensis LVF1	High-quality	High-quality	100.000	AAI-based (high-confidence)	Marchewkavirus	Marchewkavirus kabachok	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON529851	Brevundimonas phage vB_BpoS-Marchewka	348421	65.872	Brevundimonas	Group I	Marchewkavirus	Marchewkavirus	Unclassified	Jeanschmidtviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Brevundimonas pondensis LVF1	High-quality	High-quality	100.000	AAI-based (high-confidence)	Marchewkavirus	Marchewkavirus marchewka	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON529850	Brevundimonas phage vB_BpoS-Gurke	321510	63.085	Brevundimonas	Group I	Kikimoravirus	Kikimoravirus	Unclassified	Jeanschmidtviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Brevundimonas pondensis LVF1	High-quality	High-quality	100.000	AAI-based (high-confidence)	Kikimoravirus	Kikimoravirus gurke	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_144
ON529533	Proteus phage RP7	103593	38.443	Proteus	Group I	Novosibvirus	Novosibvirus	Unclassified	Demerecviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Proteus vulgaris	Complete	High-quality	100.000	DTR (high-confidence)	Novosibvirus	Novosibvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON529532	Proteus phage RP6	58619	46.903	Proteus	Group I	Lavrentievavirus	Lavrentievavirus	Unclassified	Casjensviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Proteus mirabilis	Complete	High-quality	100.000	DTR (high-confidence)	Lavrentievavirus	Lavrentievavirus pPM01	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON529291	Pseudomonas phage Ka2	66310	55.462	Pseudomonas	Group I	Pbunavirus	Pbunavirus	Unclassified	Lindbergviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa	High-quality	High-quality	100.000	AAI-based (high-confidence)	Pbunavirus	Pbunavirus LS1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON528935	Bacillus phage vB_BteM-A9Y	38634	41.047	Bacillus	Group I	Spizizenvirus	Spizizenvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus tequilensis	High-quality	High-quality	97.850	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	immunity orf_34
ON528933	Arthrobacter phage SWEP2	43398	67.547	Arthrobacter	Group I	Swepdovirus	Swepdovirus	Unclassified	Casidaviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Arthrobacter sp. 5B	Complete	High-quality	100.000	DTR (high-confidence)	Swepdovirus	Swepdovirus SWEP2	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON526985	Streptomyces phage Ejemplo	51517	65.687	Streptomyces	Group I	Likavirus	Likavirus	Arquatrovirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces griseus ATCC 10137	High-quality	High-quality	100.000	AAI-based (high-confidence)	Likavirus	Likavirus yasdnil	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	immunity orf_27;integrase orf_46
ON526984	Mycobacterium phage Tiri	59449	66.637	Mycobacterium	Group I	Anayavirus	Anayavirus	Weiservirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	97.140	AAI-based (high-confidence)	Anayavirus	Anayavirus adonis	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_40