Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
ON724013Mycobacterium phage Padpat6031066.601MycobacteriumGroup I AnayavirusAnayavirusWeiservirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality98.550AAI-based (high-confidence) AnayavirusAnayavirus adephagiaThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_40;immunity orf_42
ON724012Gordonia phage PCoral74960466.785GordoniaGroup I FairfaxidumvirusFairfaxidumvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality99.150AAI-based (high-confidence) FairfaxidumvirusFairfaxidumvirus toastThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_37
ON724011Gordonia phage Malachai5086767.419GordoniaGroup I JujuvirusJujuvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_36;immunity orf_39;antirepressor orf_42
ON724010Microbacterium phage PineapplePizza1666253.631MicrobacteriumGroup I AmherstvirusAmherstvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Microbacterium foliorum NRRL B-24224CompleteHigh-quality100.000ITR (medium-confidence) AmherstvirusAmherstvirus pineapplepizzaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
ON724009Gordonia phage Meyran4224667.611GordoniaGroup I NyceiraevirusNyceiraevirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality100.000AAI-based (high-confidence) NyceiraevirusNyceiraevirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_33
ON724008Gordonia phage Murp5149666.718GordoniaGroup I JujuvirusJujuvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_37;antirepressor orf_45
ON721385Bacteroides phage EMB23400845.798BacteroidesGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacteroides uniformisCompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
ON721384Bacteroides phage EMB13420445.539BacteroidesGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacteroides uniformisCompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
ON720977Salmonella phage GRNsp504207849.627SalmonellaGroup I JerseyvirusJerseyvirusGuernseyvirinaeSarkviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar Typhimurium SDC200701High-qualityHigh-quality98.240AAI-based (high-confidence) JerseyvirusJerseyvirus GRNsp50Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
ON720976Salmonella phage GRNsp274118751.256SalmonellaGroup I CornellvirusCornellvirusGuernseyvirinaeSarkviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar Typhimurium CMCC50115High-qualityHigh-quality96.870AAI-based (high-confidence) CornellvirusCornellvirus GRNsp27Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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