Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
ON866946Staphylococcus phage LSA231114459229.885StaphylococcusGroup I SilviavirusSilviavirusTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureus ATCC 25923CompleteHigh-quality100.000DTR (high-confidence) SilviavirusSilviavirus SA11Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
ON864052Vibrio phage vB_VpP_AC24427049.297VibrioGroup I MaculvirusMaculvirusUnclassifiedAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio parahaemolyticusHigh-qualityHigh-quality100.000AAI-based (high-confidence) MaculvirusMaculvirus AC2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
ON862890Escherichia phage A22115329749.026EscherichiaGroup I AglimvirinaeUnclassifiedAglimvirinaeAckermannviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliCompleteHigh-quality100.000DTR (high-confidence) AgtrevirusAgtrevirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
ON857943Pseudomonas phage vB_PaeP_FBPa17281454.818PseudomonasGroup I LitunavirusLitunavirusMigulavirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas sp.High-qualityHigh-quality99.830AAI-based (high-confidence) LitunavirusLitunavirus Fbpa1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
ON857942Pseudomonas phage vB_PaeM_FBPa216251155.657PseudomonasGroup I PbunavirusPbunavirusUnclassifiedLindbergviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas sp.High-qualityHigh-quality94.630AAI-based (high-confidence) PbunavirusPbunavirus FBPa14Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
ON857941Pseudomonas phage vB_PaeP_FBPa484303645.206PseudomonasGroup I JamesmcgillvirusJamesmcgillvirusUnclassifiedFredfastierviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas sp.High-qualityHigh-quality98.290AAI-based (high-confidence) JamesmcgillvirusJamesmcgillvirus PaMx41Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
ON857940Pseudomonas phage vB_PeaS_FBPa474913558.162PseudomonasGroup I DetrevirusDetrevirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas sp.High-qualityHigh-quality90.270AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperatecro orf_47;integrase orf_81
ON857939Pseudomonas phage vB_PaeS_FBPa459338655.147PseudomonasGroup I SamunavirusSamunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas sp.High-qualityHigh-quality100.000AAI-based (high-confidence) SamunavirusSamunavirus SM1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_71
ON857938Pseudomonas phage vB_PaeM_FBPa356232055.754PseudomonasGroup I PbunavirusPbunavirusUnclassifiedLindbergviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas sp.High-qualityHigh-quality94.350AAI-based (high-confidence) PbunavirusPbunavirus FBPa35Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
ON857937Pseudomonas phage vB_PaeM_FBPa346579855.608PseudomonasGroup I PbunavirusPbunavirusUnclassifiedLindbergviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas sp.High-qualityHigh-quality99.610AAI-based (high-confidence) PbunavirusPbunavirus FBPa35Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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