INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OP172643 | Bacteroides phage BC422P2 | 36509 | 46.230 | Bacteroides | Group I | Caojiangvirus | Caojiangvirus | Jianjiangvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacteroides ovatus BSC422 | Complete | High-quality | 100.000 | DTR (high-confidence) | Caojiangvirus | Caojiangvirus BC422P2 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP172642 | Bifidobacterium phage BA746P1 | 32634 | 57.486 | Bifidobacterium | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bifidobacterium adolescentis DA746 | Complete | High-quality | 100.000 | DTR (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OP172641 | Bifidobacterium phage BA720P3 | 32634 | 57.480 | Bifidobacterium | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bifidobacterium adolescentis DA720 | Complete | High-quality | 100.000 | DTR (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OP172640 | Alistipes phage AS73P1 | 45392 | 47.050 | Alistipes | Group I | Tongtianvirus | Tongtianvirus | Dravavirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Alistipes shahii DA73 | Complete | High-quality | 100.000 | DTR (high-confidence) | Tongtianvirus | Tongtianvirus AS73P1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP172639 | Amedibacillus phage AD70P3 | 12228 | 26.505 | Amedibacillus | Group I | Guelinviridae | Unclassified | Unclassified | Guelinviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Amedibacillus_QUJU_s CSC70 | Low-quality | Genome-fragment | 36.190 | HMM-based (lower-bound) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OP172638 | Amedibacillus phage AD70P2 | 12320 | 26.688 | Amedibacillus | Group I | Guelinviridae | Unclassified | Unclassified | Guelinviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Amedibacillus_QUJU_s CSC70 | Low-quality | Genome-fragment | 36.460 | HMM-based (lower-bound) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OP172637 | Anaerostipes phage AC844P3 | 36431 | 40.290 | Anaerostipes | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Anaerostipes caccae DA844 | Medium-quality | Genome-fragment | 88.720 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_59 |
| OP172636 | Anaerostipes phage AC844P2 | 36431 | 40.284 | Anaerostipes | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Anaerostipes caccae DA844 | Medium-quality | Genome-fragment | 88.730 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_59 |
| OP172635 | Anaerostipes phage AC844P1 | 36530 | 40.312 | Anaerostipes | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Anaerostipes caccae DA844 | Complete | High-quality | 100.000 | DTR (medium-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_59 |
| OP172634 | Agathobaculum phage AB434P3 | 45237 | 32.745 | Agathobaculum | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Agathobaculum butyriciproducens DA434 | Complete | High-quality | 100.000 | DTR (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic |