INPHARED2
INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OP172713 | Bacteroides phage BT401P3 | 38588 | 47.144 | Bacteroides | Group I | Lingdingyangvirus | Lingdingyangvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacteroides thetaiotaomicron BSC401 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Lingdingyangvirus | Lingdingyangvirus BT401P3 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP172712 | Bacteroides phage BT401P2 | 32313 | 47.414 | Bacteroides | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacteroides thetaiotaomicron BSC401 | Medium-quality | Genome-fragment | 85.810 | AAI-based (high-confidence) | Lingdingyangvirus | Lingdingyangvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP172711 | Bacteroides phage BT401P1 | 30566 | 46.833 | Bacteroides | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacteroides thetaiotaomicron BSC401 | Medium-quality | Genome-fragment | 81.120 | AAI-based (high-confidence) | Lingdingyangvirus | Lingdingyangvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP172710 | Bacteroides phage BT61P2 | 37809 | 46.217 | Bacteroides | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacteroides thetaiotaomicron DA61 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Lingdingyangvirus | Lingdingyangvirus BT61P1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP172709 | Bacteroides phage BT61P1 | 37746 | 46.169 | Bacteroides | Group I | Lingdingyangvirus | Lingdingyangvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacteroides thetaiotaomicron DA61 | Complete | High-quality | 100.000 | DTR (high-confidence) | Lingdingyangvirus | Lingdingyangvirus BT61P1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP172708 | Bacteroides phage BT47P1 | 37700 | 45.947 | Bacteroides | Group I | Lingdingyangvirus | Lingdingyangvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacteroides thetaiotaomicron DA47 | Complete | High-quality | 100.000 | DTR (high-confidence) | Lingdingyangvirus | Lingdingyangvirus BT47P1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP172707 | Bacteroides phage BS162P3 | 37030 | 45.409 | Bacteroides | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacteroides salyersiae BSC162 | Complete | High-quality | 100.000 | DTR (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OP172706 | Bacteroides phage BS162P1 | 88902 | 40.416 | Bacteroides | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacteroides salyersiae BSC162 | Complete | High-quality | 100.000 | DTR (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OP172705 | Bifidobacterium phage BP742P1 | 32021 | 56.266 | Bifidobacterium | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bifidobacterium pseudocatenulatum DA742 | High-quality | High-quality | 97.820 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OP172704 | Bifidobacterium phage BP677P8 | 33800 | 56.506 | Bifidobacterium | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bifidobacterium pseudocatenulatum DA667 | Complete | High-quality | 100.000 | DTR (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic |