INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OP795442	Escherichia phage A7_1	144828	41.123	Escherichia	Group I	Vequintavirinae	Unclassified	Vequintavirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli str. K-12 substr. MG1655	High-quality	High-quality	98.300	AAI-based (high-confidence)	Septuagintavirus	Septuagintavirus sv54	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP793884	Vibrio phage vB_VpaM_R16F	139011	35.207	Vibrio	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio parahaemolyticus 1.1997	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
OP793496	Pseudomonas phage vB_PseudoP-SA22	45458	52.475	Pseudomonas	Group I	Bruynoghevirus	Bruynoghevirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa	Complete	High-quality	100.000	DTR (high-confidence)	Bruynoghevirus	Bruynoghevirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP793478	Salmonella phage ZCSE9	42689	49.736	Salmonella	Group I	Jerseyvirus	Jerseyvirus	Guernseyvirinae	Sarkviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica serovar Typhi	Complete	High-quality	100.000	DTR (high-confidence)	Jerseyvirus	Jerseyvirus ZCSE9	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP792756	Aeromonas phage phiA034	61443	61.420	Aeromonas	Group I	Sharonstreetvirus	Sharonstreetvirus	Unclassified	Casjensviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Aeromonas sp. A034	High-quality	High-quality	100.000	AAI-based (high-confidence)	Sharonstreetvirus	Sharonstreetvirus xiamensis	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP785155	Klebsiella phage vB_LZ2044	50419	50.907	Klebsiella	Group I	Webervirus	Webervirus	Unclassified	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044	High-quality	High-quality	100.000	AAI-based (high-confidence)	Webervirus	Webervirus BUCT705	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP784576	Pseudomonas phage pPA-3099-2aT.3	57911	57.656	Pseudomonas	Group I	Nipunavirus	Nipunavirus	Queuovirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa 3099-2aT	Complete	High-quality	100.000	DTR (high-confidence)	Nipunavirus	Nipunavirus JG054	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP784575	Pseudomonas phage pPA-3099-2aT.2	93031	49.404	Pseudomonas	Group I	Pakpunavirus	Pakpunavirus	Skurskavirinae	Vandenendeviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa 3099-2aT	Complete	High-quality	100.000	DTR (high-confidence)	Pakpunavirus	Pakpunavirus pPA30992aT2	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	cro orf_44
OP779214	Listeria phage LP-P111	43578	35.027	Listeria	Group I	Slepowronvirus	Slepowronvirus	Trabyvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Listeria monocytogenes LM 71	High-quality	High-quality	100.000	AAI-based (high-confidence)	Slepowronvirus	Slepowronvirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_1
OP778610	Escherichia phage W70	137323	41.294	Escherichia	Group I	Vequintavirinae	Unclassified	Vequintavirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli str. K-12 substr. MG1655	High-quality	High-quality	93.200	AAI-based (high-confidence)	Septuagintavirus	Septuagintavirus A73	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic