INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OP820700	Aeromonas phage vB_AdhS_TS3	115560	41.096	Aeromonas	Group I	Shenzhenvirus	Shenzhenvirus	Unclassified	Demerecviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Aeromonas dhakensis AM	Complete	High-quality	100.000	DTR (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	lytic
OP820474	Arthrobacter phage Tuck	43992	67.035	Arthrobacter	Group I	Yangvirus	Yangvirus	Unclassified	Casidaviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Arthrobacter globiformis B-2979	High-quality	High-quality	100.000	AAI-based (high-confidence)	Yangvirus	Yangvirus tuck	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP820473	Mycobacterium phage Tooj	68010	66.496	Mycobacterium	Group I	Pegunavirus	Pegunavirus	Bclasvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	97.890	AAI-based (high-confidence)	Pegunavirus	Pegunavirus suffolk	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP820472	Gordonia phage Ecliptus	55646	63.079	Gordonia	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae CAG3	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_50
OP820471	Mycobacterium phage YoSam321	51370	63.909	Mycobacterium	Group I	Backyardiganvirus	Backyardiganvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	100.000	AAI-based (high-confidence)	Backyardiganvirus	Backyardiganvirus peaches	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_31;immunity orf_63
OP820470	Gordonia phage Mareelih	113624	53.214	Gordonia	Group I	Forzavirus	Forzavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae CAG3	Complete	High-quality	100.000	DTR (high-confidence)	Forzavirus	Forzavirus forza	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP820469	Gordonia phage Phepper	60626	51.575	Gordonia	Group I	Kenoshavirus	Kenoshavirus	Deejayvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia rubripertincta NRRL B-16540	High-quality	High-quality	99.820	AAI-based (high-confidence)	Kenoshavirus	Kenoshavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP820468	Mycobacterium phage RedBird	58738	61.463	Mycobacterium	Group I	Cheoctovirus	Cheoctovirus	Gracegardnervirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	100.000	AAI-based (high-confidence)	Cheoctovirus	Cheoctovirus dorothy	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_38;immunity orf_40;antirepressor orf_41
OP820467	Mycobacterium phage BlueBird	50456	63.828	Mycobacterium	Group I	Veracruzvirus	Veracruzvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	100.000	AAI-based (high-confidence)	Veracruzvirus	Veracruzvirus pistachio	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_30;immunity orf_68
OP820466	Mycobacterium phage Gravaillia	53924	67.599	Mycobacterium	Group I	Gilesvirus	Gilesvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	98.300	AAI-based (high-confidence)	Gilesvirus	Gilesvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_29