Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

Clear
Choose fields for download

37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
OP867020Gordonia phage Dalilpop6674565.540GordoniaGroup I GruunavirusGruunavirusEmilbogenvirinaeZierdtviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality100.000AAI-based (high-confidence) GruunavirusGruunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OP867019Gordonia phage GalacticEye7317959.061GordoniaGroup I WoesvirusWoesvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612CompleteHigh-quality100.000DTR (high-confidence) WoesvirusWoesvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_3
OP867018Mycobacterium phage Dewey5374667.452MycobacteriumGroup I GilesvirusGilesvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality97.970AAI-based (high-confidence) GilesvirusGilesvirus gilesCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_29
OP867012Shewanella phage Dolos814638.448ShewanellaGroup II SerpentivirusSerpentivirusUnclassifiedInoviridaeTubulaviralesFaserviricetesHofneiviricotaLoebviraeFloreoviria Shewanella oneidensisHigh-qualityHigh-quality99.370AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
OP866730Cronobacter phage EspYZU1514527746.747CronobacterGroup I SeunavirusSeunavirusVequintavirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Cronobacter sakazakiiHigh-qualityHigh-quality98.390AAI-based (high-confidence) SeunavirusSeunavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
OP858991Synechococcus phage Sc-Yong805-14180664.402SynechococcusUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Synechococcus elongatus PCC 7942 = FACHB-805Medium-qualityGenome-fragment55.210HMM-based (lower-bound) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_27
OP856857Staphylococcus phage PBSA0813667330.015StaphylococcusGroup I SilviavirusSilviavirusTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureus ATCC 29213CompleteHigh-quality100.000DTR (high-confidence) SilviavirusSilviavirus SA11Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_146
OP856590Escherichia phage Ec_MI-0216545435.458EscherichiaGroup I TequatrovirusTequatrovirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality98.340AAI-based (high-confidence) TequatrovirusTequatrovirus pss1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OP852425Klebsiella phage BUCT6314481254.097KlebsiellaGroup I DrulisvirusDrulisvirusSlopekvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) DrulisvirusDrulisvirus BUCT631Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OP850600Cronobacter phage EspYZU1414680646.711CronobacterGroup I SeunavirusSeunavirusVequintavirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Cronobacter sakazakiiHigh-qualityHigh-quality99.430AAI-based (high-confidence) SeunavirusSeunavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
Previous Page 1263 of 3739 Next