INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OP947158	Desulfofustis phage LS06-2018-MD01	44443	34.496	Desulfofustis	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Unspecified	Complete	High-quality	100.000	DTR (high-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
OP946502	Acinetobacter phage vB_AbaM_DLP2	165122	36.683	Acinetobacter	Group I	Lazarusvirus	Lazarusvirus	Twarogvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii AB5075	High-quality	High-quality	98.750	AAI-based (high-confidence)	Lazarusvirus	Lazarusvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP946501	Acinetobacter phage vB_AbaM_DLP1	164335	36.752	Acinetobacter	Group I	Lazarusvirus	Lazarusvirus	Twarogvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii AB5075	High-quality	High-quality	98.280	AAI-based (high-confidence)	Lazarusvirus	Lazarusvirus fhyacithree	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP940114	Staphylococcus phage vB_SauM_VL10	141746	29.862	Staphylococcus	Group I	Silviavirus	Silviavirus	Twortvirinae	Herelleviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Staphylococcus aureus ATCC43300	High-quality	High-quality	100.000	AAI-based (high-confidence)	Silviavirus	Silviavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_63;integrase orf_97
OP926972	Listeria phage FHC174-PLM34	32895	37.009	Listeria	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Listeria monocytogenes	Medium-quality	Genome-fragment	79.980	AAI-based (medium-confidence)	New_genus	New_species	No hits were found with the default settings	temperate	integrase orf_4;cro orf_24;integrase orf_28
OP926971	Listeria phage FHC15313-PLM26	41221	35.453	Listeria	Group I	Slepowronvirus	Slepowronvirus	Trabyvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Listeria monocytogenes	High-quality	High-quality	97.530	AAI-based (high-confidence)	Slepowronvirus	Slepowronvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_28
OP924544	Pseudomonas phage UFJF_PfSW6	38758	54.582	Pseudomonas	Group I	Pijolavirus	Pijolavirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas fluorescens UFV 041	Complete	High-quality	100.000	DTR (high-confidence)	Pijolavirus	Pijolavirus UFJFPfSW6	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OP924285	Salmonella phage vB_Se_GLBO_sp11	40715	47.469	Salmonella	Group I	Lederbergvirus	Lederbergvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica serovar Enteritidis FSL S5-371	Complete	High-quality	100.000	DTR (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_24;integrase orf_35;antirepressor orf_46
OP924284	Salmonella phage vB_St_LL_sp9	42325	50.849	Salmonella	Group I	Guernseyvirinae	Unclassified	Guernseyvirinae	Sarkviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica serovar Typhimurium FSL S5-370	Complete	High-quality	100.000	DTR (high-confidence)	Cornellvirus	Cornellvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP924283	Salmonella phage vB_Si_GLBO_sp8	52535	45.918	Salmonella	Group I	Rosemountvirus	Rosemountvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica serovar Infantis FSL S5-506	Complete	High-quality	100.000	DTR (high-confidence)	Rosemountvirus	Rosemountvirus BP63	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic