INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OQ101251	Acinetobacter phage Acba_6	42776	39.319	Acinetobacter	Group I	Friunavirus	Friunavirus	Beijerinckvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii 3940	High-quality	High-quality	100.000	AAI-based (high-confidence)	Friunavirus	Friunavirus Acba6	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OQ101250	Acinetobacter phage Acba_1	50696	38.893	Acinetobacter	Group I	Vieuvirus	Vieuvirus	Unclassified	Buchnerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	antirepressor orf_52;integrase orf_69
OQ101249	Acinetobacter phage Acba_4	57429	40.060	Acinetobacter	Group I	Lowersilesiavirus	Lowersilesiavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii 1971	High-quality	High-quality	100.000	AAI-based (high-confidence)	Lowersilesiavirus	Lowersilesiavirus Acba4	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_54;integrase orf_69
OQ101248	Acinetobacter phage Acba_3	55181	40.057	Acinetobacter	Group I	Lowersilesiavirus	Lowersilesiavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii 1971	High-quality	High-quality	100.000	AAI-based (high-confidence)	Lowersilesiavirus	Lowersilesiavirus Acba3	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_45;integrase orf_60
OQ095919	Vibrio phage Noelle	127182	40.212	Vibrio	Group I	Thalassavirus	Thalassavirus	Ermolyevavirinae	Demerecviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio harveyi BAA-1116	Complete	High-quality	100.000	DTR (high-confidence)	Thalassavirus	Thalassavirus chester	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OQ095918	Vibrio phage Kronos	128276	40.154	Vibrio	Group I	Thalassavirus	Thalassavirus	Ermolyevavirinae	Demerecviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio harveyi BAA-1116	Complete	High-quality	100.000	DTR (high-confidence)	Thalassavirus	Thalassavirus bennett	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OQ095917	Vibrio phage Javier	127945	40.300	Vibrio	Group I	Thalassavirus	Thalassavirus	Ermolyevavirinae	Demerecviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio harveyi BAA-1116	Complete	High-quality	100.000	DTR (high-confidence)	Thalassavirus	Thalassavirus cody	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OQ095916	Vibrio phage Chloris	128785	40.175	Vibrio	Group I	Thalassavirus	Thalassavirus	Ermolyevavirinae	Demerecviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio harveyi BAA-1116	Complete	High-quality	100.000	DTR (high-confidence)	Thalassavirus	Thalassavirus achelous	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OQ095915	Vibrio phage Wyman	128451	40.303	Vibrio	Group I	Thalassavirus	Thalassavirus	Ermolyevavirinae	Demerecviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio harveyi BAA-1116	Complete	High-quality	100.000	DTR (high-confidence)	Thalassavirus	Thalassavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OQ094961	Staphylococcus phage SSP49	137283	30.009	Staphylococcus	Group I	Silviavirus	Silviavirus	Twortvirinae	Herelleviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Staphylococcus aureus ATCC 13301	Complete	High-quality	100.000	DTR (high-confidence)	Silviavirus	Silviavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_145