Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
OQ135104Caulobacter phage KSC4364759.947CaulobacterGroup I PercyvirusPercyvirusUnclassifiedAutonotataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Caulobacter vibrioidesCompleteHigh-quality100.000DTR (high-confidence) PercyvirusPercyvirus KSCThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
OQ135103Caulobacter phage BL1994430461.333CaulobacterGroup I PercyvirusPercyvirusUnclassifiedAutonotataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Caulobacter vibrioidesCompleteHigh-quality100.000DTR (high-confidence) DcimvirusDcimvirus DCMThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
OQ135102Caulobacter phage BL1984496161.589CaulobacterGroup I PercyvirusPercyvirusUnclassifiedAutonotataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Caulobacter vibrioidesCompleteHigh-quality100.000DTR (high-confidence) PercyvirusPercyvirus BL198The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
OQ134474Pseudomonas phage vB_PaeP_PS287228354.753PseudomonasGroup I LitunavirusLitunavirusMigulavirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosaHigh-qualityHigh-quality99.240AAI-based (high-confidence) LitunavirusLitunavirus Ps28Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OQ129426Staphylococcus phage vB_SauM_JDF8614629629.797StaphylococcusGroup I BaoshanvirusBaoshanvirusTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureusHigh-qualityHigh-quality99.570AAI-based (high-confidence) BaoshanvirusBaoshanvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OQ129425Staphylococcus phage vB_SauM_JDYN14383930.804StaphylococcusGroup I TwortvirinaeUnclassifiedTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureusHigh-qualityHigh-quality100.000AAI-based (high-confidence) KayvirusKayvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OQ129412Gordonia phage Holliday5681162.872GordoniaGroup I GetalongvirusGetalongvirusLangleyhallvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae NRRL B-16283High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_47
OQ129411Gordonia phage Battleship5275361.881GordoniaGroup I SoupsvirusSoupsvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae CAG3High-qualityHigh-quality99.690AAI-based (high-confidence) SoupsvirusSoupsvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateparA orf_31;immunity orf_75
OQ129410Gordonia phage Dakiti7773158.583GordoniaGroup I MontyvirusMontyvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae CAG3CompleteHigh-quality100.000DTR (high-confidence) MontyvirusMontyvirus chelmsCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OQ116603Bacteroides phage vB_BfrS_UZM34605438.893BacteroidesGroup I GotuavirusGotuavirusCardingvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacteroides fragilisHigh-qualityHigh-quality99.180AAI-based (high-confidence) GotuavirusGotuavirus UZM3Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_62
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