INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OQ221539	Bacteroides phage PhiCrAssBcn4	101446	35.180	Bacteroides	Group I	Kehishuvirus	Kehishuvirus	Asinivirinae	Steigviridae	Crassvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacteroides intestinalis DSM 108646	High-quality	High-quality	100.000	AAI-based (high-confidence)	Kehishuvirus	Kehishuvirus intestinalimedialis	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OQ221538	Bacteroides phage PhiCrAssBcn3	99312	35.079	Bacteroides	Group I	Kehishuvirus	Kehishuvirus	Asinivirinae	Steigviridae	Crassvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacteroides intestinalis DSM 108646	Complete	High-quality	100.000	DTR (high-confidence)	Kehishuvirus	Kehishuvirus hominis	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OQ221537	Bacteroides phage PhiCrAssBcn2	99311	35.079	Bacteroides	Group I	Kehishuvirus	Kehishuvirus	Asinivirinae	Steigviridae	Crassvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacteroides intestinalis DSM 108646	Complete	High-quality	100.000	DTR (high-confidence)	Kehishuvirus	Kehishuvirus hominis	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OQ221536	Bacteroides phage PhiCrAssBcn1	99312	35.072	Bacteroides	Group I	Kehishuvirus	Kehishuvirus	Asinivirinae	Steigviridae	Crassvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacteroides intestinalis DSM 108646	Complete	High-quality	100.000	DTR (high-confidence)	Kehishuvirus	Kehishuvirus hominis	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OQ210008	Pseudomonas phage JS	91095	49.264	Pseudomonas	Group I	Pakpunavirus	Pakpunavirus	Skurskavirinae	Vandenendeviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa Paer42	High-quality	High-quality	97.950	AAI-based (high-confidence)	Pakpunavirus	Pakpunavirus js	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OQ210007	Pseudomonas phage MK	91920	49.457	Pseudomonas	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Pseudomonas aeruginosa Paer36	High-quality	High-quality	98.840	AAI-based (high-confidence)	Pakpunavirus	Pakpunavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OQ201593	Mycobacterium phage RitVan	42068	66.773	Mycobacterium	Group I	Liefievirus	Liefievirus	Gclasvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycolicobacterium smegmatis mc^2 155	High-quality	High-quality	96.860	AAI-based (high-confidence)	Liefievirus	Liefievirus grizzly	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_32
OQ200059	Pseudomonas phage vB_PaeM_B55	91901	49.365	Pseudomonas	Group I	Pakpunavirus	Pakpunavirus	Skurskavirinae	Vandenendeviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa B55	High-quality	High-quality	98.820	AAI-based (high-confidence)	Pakpunavirus	Pakpunavirus B55	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OQ198719	Rudgehvirus jaberico	90575	29.147	Unspecified	Group I	Rudgehvirus	Rudgehvirus	Unclassified	Intestiviridae	Crassvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacteroides cellulosilyticus	High-quality	High-quality	98.630	AAI-based (high-confidence)	Rudgehvirus	Rudgehvirus jaberico	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OQ198718	Kolpuevirus frurule	99525	32.999	Unspecified	Group I	Kolpuevirus	Kolpuevirus	Asinivirinae	Steigviridae	Crassvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacteroides cellulosilyticus	High-quality	High-quality	100.000	AAI-based (high-confidence)	Kolpuevirus	Kolpuevirus frurule	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic