INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OQ709222	Rhodococcus phage Trogglehumper	83592	63.830	Rhodococcus	Group I	Trogglehumpervirus	Trogglehumpervirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Rhodococcus erythropolis NRRL B-1574	Complete	High-quality	100.000	DTR (high-confidence)	Trogglehumpervirus	Trogglehumpervirus trogglehumper	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OQ709221	Mycobacterium phage Casbah	68754	67.454	Mycobacterium	Group I	Pipefishvirus	Pipefishvirus	Bclasvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	98.500	AAI-based (high-confidence)	Pipefishvirus	Pipefishvirus athena	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OQ709220	Arthrobacter phage Inked	57862	51.754	Arthrobacter	Group I	Gordonvirus	Gordonvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Arthrobacter sp. ATCC 21022	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	lytic
OQ709219	Mycobacterium Phage Lunahalos	59708	66.544	Mycobacterium	Group I	Anayavirus	Anayavirus	Weiservirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	97.560	AAI-based (high-confidence)	Anayavirus	Anayavirus adephagia	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_40;immunity orf_42
OQ709218	Arthrobacter phage Ascela	44192	67.447	Arthrobacter	Group I	Yangvirus	Yangvirus	Unclassified	Casidaviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Arthrobacter globiformis B-2979	High-quality	High-quality	100.000	AAI-based (high-confidence)	Yangvirus	Yangvirus ascela	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_51
OQ709217	Mycobacterium phage Tucker	52245	61.386	Mycobacterium	Group I	Gladiatorvirus	Gladiatorvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	99.340	AAI-based (high-confidence)	Gladiatorvirus	Gladiatorvirus zaka	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	parA orf_31;immunity orf_69
OQ709216	Arthrobacter phage Emotion	45092	67.941	Arthrobacter	Group I	Emotionvirus	Emotionvirus	Unclassified	Casidaviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Arthrobacter sulfureus NRRL B-14730	High-quality	High-quality	100.000	AAI-based (high-confidence)	Emotionvirus	Emotionvirus emotion	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OQ709215	Mycobacterium phage Etaye	68950	66.374	Mycobacterium	Group I	Pegunavirus	Pegunavirus	Bclasvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	99.240	AAI-based (high-confidence)	Pegunavirus	Pegunavirus oline	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OQ709214	Arthrobacter phage ObiToo	43969	68.828	Arthrobacter	Group I	Manhattanvirus	Manhattanvirus	Unclassified	Casidaviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Arthrobacter globiformis B-2979	High-quality	High-quality	100.000	AAI-based (high-confidence)	Manhattanvirus	Manhattanvirus crewmate	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_53
OQ709213	Microbacterium phage Bee17	15636	54.579	Microbacterium	Group I	Tectiviridae	Unclassified	Unclassified	Tectiviridae	Kalamavirales	Tectiliviricetes	Preplasmiviricota	Bamfordvirae	Varidnaviria	Microbacterium testaceum NRRL B-24232	Low-quality	Genome-fragment	6.160	HMM-based (lower-bound)	New_genus	New_species	No hits were found with the default settings	lytic