INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OQ981145 | Staphylococcus phage Baghdad | 140627 | 30.218 | Staphylococcus | Group I | Kayvirus | Kayvirus | Twortvirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 99.320 | AAI-based (high-confidence) | Kayvirus | Kayvirus P108 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OQ980420 | Vibrio phage BP14 | 9071 | 44.019 | Vibrio | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio sp. | Medium-quality | Genome-fragment | 83.870 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OQ974181 | Achromobacter phage 2-1 | 82711 | 59.441 | Achromobacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Achromobacter xylosoxidans | Complete | High-quality | 100.000 | DTR (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_67 |
| OQ973471 | Escherichia phage AV101 | 156759 | 48.959 | Escherichia | Group I | Aglimvirinae | Unclassified | Aglimvirinae | Ackermannviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli | High-quality | High-quality | 99.210 | AAI-based (high-confidence) | Agtrevirus | Agtrevirus new_name | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| OQ970439 | Streptomyces phage Verabelle | 49832 | 64.990 | Streptomyces | Group I | Camvirus | Camvirus | Arquatrovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptomyces coelicolor | Complete | High-quality | 100.000 | DTR (high-confidence) | Camvirus | Camvirus verabelle | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_46 |
| OQ970438 | Streptomyces phage Vanseggelen | 50426 | 65.452 | Streptomyces | Group I | Camvirus | Camvirus | Arquatrovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptomyces coelicolor | Complete | High-quality | 100.000 | DTR (high-confidence) | Camvirus | Camvirus vanseggelen | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_46 |
| OQ970155 | Pseudomonas phage LSL4 | 87739 | 54.748 | Pseudomonas | Group I | Nankokuvirus | Nankokuvirus | Unclassified | Vandenendeviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa PAO1 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Nankokuvirus | Nankokuvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OQ968807 | Pseudomonas phage vB_PaeM_P1420 | 66997 | 55.646 | Pseudomonas | Group I | Pbunavirus | Pbunavirus | Unclassified | Lindbergviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa PA14 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Pbunavirus | Pbunavirus USP1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OQ957557 | Enterobacter phage ST22 | 45779 | 55.571 | Enterobacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Enterobacter sp. | High-quality | High-quality | 100.000 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OQ955832 | Escherichia phage vB_EcoS_PJ16 | 57756 | 43.578 | Escherichia | Group I | Nonanavirus | Nonanavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Multidrug resistant Escherichia coli | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Sashavirus | Sashavirus new_name | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic |