INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OQ995431	Streptomyces phage Patelgo	130302	47.170	Streptomyces	Group I	Gilsonvirus	Gilsonvirus	Loccivirinae	Stanwilliamsviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces mirabilis NRRL B-2400	Complete	High-quality	100.000	DTR (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	lytic
OQ995430	Streptomyces phage Kenrey	129554	47.008	Streptomyces	Group I	Gilsonvirus	Gilsonvirus	Loccivirinae	Stanwilliamsviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces griseus ATCC 10137	Complete	High-quality	100.000	DTR (high-confidence)	Gilsonvirus	Gilsonvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OQ995429	Streptomyces phage Provolone	49042	65.907	Streptomyces	Group I	Camvirus	Camvirus	Arquatrovirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces bicolor NRRL B-3897	High-quality	High-quality	97.900	AAI-based (high-confidence)	Camvirus	Camvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	immunity orf_25;immunity orf_29;integrase orf_50
OQ995428	Mycobacterium phage SlimJimmy	81754	61.476	Mycobacterium	Group I	Bongovirus	Bongovirus	Mclasvirinae	Vilmaviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	99.380	AAI-based (high-confidence)	Bongovirus	Bongovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_106
OQ995427	Microbacterium phage RikSengupta	57187	62.731	Microbacterium	Group I	Krampusvirus	Krampusvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Microbacterium foliorum NRRL B-24224 SEA	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
OQ995426	Gordonia Phage SchottB	58367	67.997	Gordonia	Group I	Kroosvirus	Kroosvirus	Schenleyvirinae	Stackebrandtviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae 3612	High-quality	High-quality	99.320	AAI-based (high-confidence)	Kroosvirus	Kroosvirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OQ995425	Arthrobacter phage PeggyLeg03	43268	65.101	Arthrobacter	Group I	Bridgettevirus	Bridgettevirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Arthrobacter globiformis NRRL B-2979	High-quality	High-quality	100.000	AAI-based (high-confidence)	Bridgettevirus	Bridgettevirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_34;integrase orf_37
OQ993070	Vibrio phage VPy01	76133	48.882	Vibrio	Group I	Mardecavirus	Mardecavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio parahaemolyticus NCCP 13714	Complete	High-quality	100.000	DTR (high-confidence)	Mardecavirus	Mardecavirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OQ992562	Pseudomonas phage PhiPizzaParty	280316	36.898	Pseudomonas	Group I	Phikzvirus	Phikzvirus	Unclassified	Chimalliviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa	High-quality	High-quality	99.990	AAI-based (high-confidence)	Phikzvirus	Phikzvirus phiKZ	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OQ992561	Pseudomonas phage ANB1	278927	36.773	Pseudomonas	Group I	Phikzvirus	Phikzvirus	Unclassified	Chimalliviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa	High-quality	High-quality	99.500	AAI-based (high-confidence)	Phikzvirus	Phikzvirus phiKZ	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic