INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Explore INPHARED2 data visually

Create interactive summaries of genome metadata and download the resulting figures.

Open graphs

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

Host (NCBI)

Family (NCBI)

Genus (TaxMyPhage)

CheckV quality

PhageLeads lifestyle

Rows

Clear

Choose fields for download

37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle
OR062943	Escherichia phage 241Ecol014PP	138401	43.586	Escherichia	Group I	Vequintavirus	Vequintavirus	Vequintavirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	Complete	High-quality	100.000	DTR (high-confidence)	Vequintavirus	Vequintavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR062530	Escherichia phage vB_EcoM_366V_SA_NWU	136485	43.630	Escherichia	Group I	Vequintavirus	Vequintavirus	Vequintavirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli O177	High-quality	High-quality	97.290	AAI-based (high-confidence)	Vequintavirus	Vequintavirus alexboehm	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR062529	Escherichia phage vB_EcoM_118_SA_NWU	151980	39.104	Escherichia	Group I	Phapecoctavirus	Phapecoctavirus	Stephanstirmvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli O177	High-quality	High-quality	100.000	AAI-based (high-confidence)	Phapecoctavirus	Phapecoctavirus schickermooser	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR062528	Escherichia phage vB_EcoM_12A_SA_NWU	136483	43.631	Escherichia	Group I	Vequintavirus	Vequintavirus	Vequintavirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli O177	High-quality	High-quality	97.290	AAI-based (high-confidence)	Vequintavirus	Vequintavirus alexboehm	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR062527	Escherichia phage vB_EcoM_11B_SA_NWU	166610	35.402	Escherichia	Group I	Tequatrovirus	Tequatrovirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli O177	High-quality	High-quality	99.060	AAI-based (high-confidence)	Tequatrovirus	Tequatrovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR062526	Escherichia phage vB_EcoM_10C3_SA_NWU	151980	39.104	Escherichia	Group I	Phapecoctavirus	Phapecoctavirus	Stephanstirmvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli O177	High-quality	High-quality	100.000	AAI-based (high-confidence)	Phapecoctavirus	Phapecoctavirus schickermooser	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR062525	Escherichia phage vB_EcoM_10C2_SA_NWU	136476	43.630	Escherichia	Group I	Vequintavirus	Vequintavirus	Vequintavirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli O177	High-quality	High-quality	97.280	AAI-based (high-confidence)	Vequintavirus	Vequintavirus alexboehm	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR062524	Escherichia phage vB_EcoM_3A1_SA_NWU	150431	39.058	Escherichia	Group I	Phapecoctavirus	Phapecoctavirus	Stephanstirmvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli O177	High-quality	High-quality	99.250	AAI-based (high-confidence)	Phapecoctavirus	Phapecoctavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR061069	Escherichia phage M01	45294	50.863	Escherichia	Group I	Guernseyvirinae	Unclassified	Guernseyvirinae	Sarkviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia sp.	High-quality	High-quality	100.000	AAI-based (medium-confidence)	Kagunavirus	Kagunavirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OR061068	Escherichia phage CR01	45236	50.858	Escherichia	Group I	Guernseyvirinae	Unclassified	Guernseyvirinae	Sarkviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia sp.	High-quality	High-quality	100.000	AAI-based (high-confidence)	Kagunavirus	Kagunavirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic