INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PZ150979 | Bacteroides phage BF4V58 | 46585 | 38.892 | Bacteroides | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Bacteroides fragilis 004 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Kherlenvirus | Kherlenvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | antirepressor orf_10;antirepressor orf_26 |
| PZ150978 | Bacteroides phage BF22V65 | 45010 | 39.169 | Bacteroides | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Bacteroides fragilis 022 | High-quality | High-quality | 97.050 | AAI-based (high-confidence) | Kherlenvirus | Kherlenvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | antirepressor orf_20;antirepressor orf_35;antirepressor orf_52 |
| PZ150977 | Bacteroides phage BF15W62 | 35758 | 46.499 | Bacteroides | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Bacteroides ovatus 015 | High-quality | High-quality | 98.960 | AAI-based (high-confidence) | Caojiangvirus | Caojiangvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PZ150976 | Bacteroides phage BF131Y47 | 45878 | 39.027 | Bacteroides | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Bacteroides fragilis 131 | High-quality | High-quality | 98.920 | AAI-based (high-confidence) | Kherlenvirus | Kherlenvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | antirepressor orf_10;antirepressor orf_25;antirepressor orf_41 |
| PZ150975 | Bacteroides phage BF131U46 | 47711 | 38.794 | Bacteroides | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Bacteroides fragilis 131 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Kherlenvirus | Kherlenvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | antirepressor orf_28 |
| PZ150974 | Bacteroides phage BF131U45 | 46635 | 38.713 | Bacteroides | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Bacteroides fragilis 131 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Kherlenvirus | Kherlenvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | antirepressor orf_28 |
| PZ150973 | Bacteroides phage BF120Z41 | 36426 | 45.385 | Bacteroides | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Bacteroides fragilis 120 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PZ150972 | Bacteroides phage BF120U40 | 46215 | 38.990 | Bacteroides | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Bacteroides fragilis 120 | High-quality | High-quality | 99.660 | AAI-based (high-confidence) | Kherlenvirus | Kherlenvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | antirepressor orf_8;antirepressor orf_25;antirepressor orf_42 |
| PZ150971 | Bacteroides phage BF119V42 | 46238 | 39.091 | Bacteroides | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Bacteroides fragilis 119 | High-quality | High-quality | 99.700 | AAI-based (high-confidence) | Kherlenvirus | Kherlenvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | antirepressor orf_29;antirepressor orf_64 |
| PZ150970 | Bacteroides phage BF119U43 | 45655 | 39.076 | Bacteroides | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Bacteroides fragilis 119 | High-quality | High-quality | 98.450 | AAI-based (high-confidence) | Kherlenvirus | Kherlenvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | antirepressor orf_22 |