INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OR513095	Salmonella phage STP-SP9	113775	40.332	Salmonella	Group I	Epseptimavirus	Epseptimavirus	Markadamsvirinae	Demerecviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica serovar Typhimurium	High-quality	High-quality	100.000	AAI-based (high-confidence)	Epseptimavirus	Epseptimavirus PRFSP13	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OR513094	Salmonella phage STP-SP8	39849	50.297	Salmonella	Group I	Kayfunavirus	Kayfunavirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica serovar Typhi B37239/20	High-quality	High-quality	100.000	AAI-based (high-confidence)	Kayfunavirus	Kayfunavirus PRFSP1	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OR513093	Salmonella phage STP-SP7	39849	50.297	Salmonella	Group I	Kayfunavirus	Kayfunavirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica serovar Typhi B37239/20	High-quality	High-quality	100.000	AAI-based (high-confidence)	Kayfunavirus	Kayfunavirus PRFSP1	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OR513085	Chryseobacterium phage MA9V-2	218539	36.234	Chryseobacterium	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Chryseobacterium indologenes MA9	Complete	High-quality	100.000	DTR (medium-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
OR509663	Bacillus phage vB_BanS-A16R1	39569	35.030	Bacillus	Group I	Wbetavirus	Wbetavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus anthracis str. A16R	High-quality	High-quality	99.900	AAI-based (high-confidence)	Wbetavirus	Wbetavirus AP631	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_26;antirepressor orf_34
OR509662	Bacillus phage vB_BanS-A16R4	40059	35.006	Bacillus	Group I	Hubeivirus	Hubeivirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus anthracis str. A16R	Complete	High-quality	100.000	DTR (high-confidence)	Hubeivirus	Hubeivirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_14;integrase orf_45
OR509539	Pseudomonas phage PASB7	72635	54.691	Pseudomonas	Group I	Litunavirus	Litunavirus	Migulavirinae	Schitoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa	High-quality	High-quality	99.730	AAI-based (high-confidence)	Litunavirus	Litunavirus Pasb7	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR508996	Enterobacter phage Mulvp2	58539	50.233	Enterobacter	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Enterobacter mori GQN5-3	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
OR506460	Enterococcus phage AS-M1_NWU	58683	46.857	Enterococcus	Group I	Lavrentievavirus	Lavrentievavirus	Unclassified	Casjensviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Enterococcus durans	High-quality	High-quality	98.510	AAI-based (high-confidence)	Lavrentievavirus	Lavrentievavirus PM87	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR502445	Klebsiella phage KZag1	157089	46.386	Klebsiella	Group I	Taipeivirus	Taipeivirus	Unclassified	Ackermannviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae	High-quality	High-quality	99.410	AAI-based (high-confidence)	Taipeivirus	Taipeivirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic