INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle
OR544125	Acinetobacter phage vB_AbaM_AB4P2	45680	46.125	Acinetobacter	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii	Complete	High-quality	100.000	DTR (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	lytic
OR540302	Pseudomonas phage vB_PaeM_PKMS3	66214	55.609	Pseudomonas	Group I	Pbunavirus	Pbunavirus	Unclassified	Lindbergviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa	Complete	High-quality	100.000	DTR (high-confidence)	Pbunavirus	Pbunavirus LS1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR539221	Escherichia phage vB-Eco-KMB42	165962	35.381	Escherichia	Group I	Tequatrovirus	Tequatrovirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli KL6	High-quality	High-quality	98.670	AAI-based (high-confidence)	Tequatrovirus	Tequatrovirus sf23	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR539220	Escherichia phage vB-Eco-KMB40	166966	35.457	Escherichia	Group I	Tequatrovirus	Tequatrovirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli KL53	High-quality	High-quality	99.310	AAI-based (high-confidence)	Tequatrovirus	Tequatrovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR539219	Escherichia phage vB-Eco-KMB39	168887	35.405	Escherichia	Group I	Tequatrovirus	Tequatrovirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli KMB518	High-quality	High-quality	100.000	AAI-based (high-confidence)	Tequatrovirus	Tequatrovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR539218	Escherichia phage vB-Eco-KMB26	168222	35.339	Escherichia	Group I	Tequatrovirus	Tequatrovirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli KMB517	High-quality	High-quality	100.000	AAI-based (high-confidence)	Tequatrovirus	Tequatrovirus ecombl75	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR539217	Escherichia phage vB-Eco-KMB22	167010	35.412	Escherichia	Group I	Tequatrovirus	Tequatrovirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli KMB507	High-quality	High-quality	99.340	AAI-based (high-confidence)	Tequatrovirus	Tequatrovirus teqdroes	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR539216	Escherichia phage vB-Eco-KMB41	41822	59.230	Escherichia	Group I	Murrayvirus	Murrayvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli KMB704	High-quality	High-quality	100.000	AAI-based (high-confidence)	Murrayvirus	Murrayvirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
OR538763	Pseudomonas phage PSP30	45373	52.135	Pseudomonas	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa PAO1	High-quality	High-quality	100.000	AAI-based (high-confidence)	Bruynoghevirus	Bruynoghevirus PaP3	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR538762	Pseudomonas phage PSP3-DeSoir-2023	66308	55.533	Pseudomonas	Group I	Pbunavirus	Pbunavirus	Unclassified	Lindbergviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa PAO1	High-quality	High-quality	100.000	AAI-based (high-confidence)	Pbunavirus	Pbunavirus LS1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic