Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PZ151049Bacteroides phage BXYW883642545.982BacteroidesUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Bacteroides xylanisolvens BXYHigh-qualityHigh-quality100.000AAI-based (high-confidence) CaojiangvirusCaojiangvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ151048Bacteroides phage BXYV923644345.990BacteroidesUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Bacteroides xylanisolvens BXYHigh-qualityHigh-quality100.000AAI-based (high-confidence) CaojiangvirusCaojiangvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ151047Bacteroides phage BXYC30V614476944.390BacteroidesUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Bacteroides xylanisolvens C-30High-qualityHigh-quality99.020AAI-based (high-confidence) TongtianvirusTongtianvirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
PZ151046Bacteroides phage BXYA3W903581646.602BacteroidesUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Bacteroides xylanisolvens SZ-A3High-qualityHigh-quality99.100AAI-based (high-confidence) CaojiangvirusCaojiangvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ151045Bacteroides phage BXY67V093739846.160BacteroidesUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Bacteroides xylanisolvens 67High-qualityHigh-quality100.000AAI-based (high-confidence) CaojiangvirusCaojiangvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ151044Bacteroides phage BXY67V073589046.342BacteroidesUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Bacteroides xylanisolvens 67High-qualityHigh-quality99.310AAI-based (high-confidence) CaojiangvirusCaojiangvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ151043Bacteroides phage BXY67V063616146.052BacteroidesUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Bacteroides xylanisolvens 67High-qualityHigh-quality100.000AAI-based (high-confidence) CaojiangvirusCaojiangvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ151042Bacteroides phage BSHPL24V602600344.610BacteroidesUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Bacteroides stercoris hpl-24Medium-qualityGenome-fragment72.170AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PZ151041Bacteroides phage BOS5X723582946.401BacteroidesUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Bacteroides ovatus S-5CompleteHigh-quality100.000DTR (high-confidence) CaojiangvirusCaojiangvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ151040Bacteroides phage BON20W693605246.746BacteroidesUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Bacteroides ovatus N-20High-qualityHigh-quality99.770AAI-based (high-confidence) CaojiangvirusCaojiangvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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