Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
OR842557Escherichia phage 0408617725339.401EscherichiaGroup I DhakavirusDhakavirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia sp.High-qualityHigh-quality100.000AAI-based (high-confidence) DhakavirusDhakavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_273
OR838459Stenotrophomonas phage StenR_2696632249.729StenotrophomonasGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Stenotrophomonas rhizophila CEMTC 4565High-qualityHigh-quality100.000AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
OR836606Staphylococcus phage LY0125889725.134StaphylococcusGroup I MadawaskavirusMadawaskavirusWallmarkvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureus YZ4High-qualityHigh-quality97.100AAI-based (high-confidence) MadawaskavirusMadawaskavirus LY01Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OR822025Enterobacter phage NJ23960552.640EnterobacterGroup I YuanmingyuanvirusYuanmingyuanvirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterobacter cloacaeHigh-qualityHigh-quality99.070AAI-based (high-confidence) YuanmingyuanvirusYuanmingyuanvirus NJ2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OR820950Klebsiella phage vB_KpnS-K74908851.061KlebsiellaGroup I WebervirusWebervirusUnclassifiedDrexlerviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality99.080AAI-based (high-confidence) WebervirusWebervirus TAH8Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OR820920Bacillus phage vB_BpuM-ZY13716158.432BacillusGroup I PeduoviridaeUnclassifiedUnclassifiedPeduoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus pumilusHigh-qualityHigh-quality100.000AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_49
OR820515Ralstonia phage AhaGv6178564.687RalstoniaGroup I GervaisevirusGervaisevirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Ralstonia solanacearum CQPS-1High-qualityHigh-quality100.000AAI-based (high-confidence) GervaisevirusGervaisevirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_12;antirepressor orf_28
OR820514Xanthomonas phage AhaSv5557663.236XanthomonasGroup I SalvovirusSalvovirusUnclassifiedCasjensviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Xanthomonas campestris pv. campestris str. 8004High-qualityHigh-quality99.640AAI-based (high-confidence) SalvovirusSalvovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OR813930Mycobacterium phage WXIN11515861.898MycobacteriumGroup I OmegavirusOmegavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycolicibacterium septicumHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_77
OR813779Vibrio phage vB_VpM-pA2SJ15105443.701VibrioGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio parahaemolyticus KCTC 2471High-qualityHigh-quality100.000AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateantirepressor orf_10
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