Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

Clear
Choose fields for download

36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
CAJDJX010000002Enterococcus phage Q694214134.567EnterococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality100.000AAI-based (high-confidence) EfquatrovirusEfquatrovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
CAJDJY010000002Enterococcus phage 15614113335.789EnterococcusGroup I KochikohdavirusKochikohdavirusBrockvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality99.110AAI-based (high-confidence) KochikohdavirusKochikohdavirus kv149Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
CAJDJZ010000002Enterococcus phage vB_EfaH_14914221535.965EnterococcusGroup I KochikohdavirusKochikohdavirusBrockvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality98.580AAI-based (high-confidence) KochikohdavirusKochikohdavirus kv149Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
CAJDKA010000002Enterococcus phage 16315083637.036EnterococcusGroup I SchiekvirusSchiekvirusBrockvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality98.830AAI-based (high-confidence) SchiekvirusSchiekvirus 163Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
CAJDKB010000002Enterococcus phage vB_EhiS_2684054234.870EnterococcusGroup I DelfunavirusDelfunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality96.300AAI-based (high-confidence) DelfunavirusDelfunavirus v268Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
CAJDKF010000002Enterococcus phage vB_EfaS_1594171834.359EnterococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality100.000AAI-based (high-confidence) EfquatrovirusEfquatrovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
CAKLQA020000001Acinetobacter phage MD-2021a5031038.605AcinetobacterGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedCompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_45
CAKLQA020000002Acinetobacter phage MD-2021a4766537.730AcinetobacterGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedCompleteHigh-quality100.000DTR (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
CAKLQA020000003Acinetobacter phage MD-2021a3746840.467AcinetobacterGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedMedium-qualityGenome-fragment66.560HMM-based (lower-bound) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_21
CAKLQB020000001Acinetobacter phage MD-2021b4254139.334AcinetobacterGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality100.000AAI-based (high-confidence) FriunavirusFriunavirus 5899STDY8049180Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
Previous Page 58 of 3635 Next