Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
KY705281Streptococcus phage P79553693138.935StreptococcusGroup I BrussowvirusBrussowvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilus ST47795High-qualityHigh-quality96.280AAI-based (high-confidence) BrussowvirusBrussowvirus P7955The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperatecro orf_28;antirepressor orf_30;cro orf_31
KY705282Streptococcus phage P89213451639.002StreptococcusGroup I MoineauvirusMoineauvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilus ST64892High-qualityHigh-quality93.040AAI-based (high-confidence) MoineauvirusMoineauvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY705283Streptococcus phage P89223450938.819StreptococcusGroup I MoineauvirusMoineauvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilus ST64892High-qualityHigh-quality93.050AAI-based (high-confidence) MoineauvirusMoineauvirus P7154Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY705284Streptococcus phage P98513583539.074StreptococcusGroup I MoineauvirusMoineauvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilus ST64985High-qualityHigh-quality96.850AAI-based (high-confidence) MoineauvirusMoineauvirus P9851The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateantirepressor orf_26;cro orf_27
KY705285Streptococcus phage P98523463840.040StreptococcusGroup I BrussowvirusBrussowvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilus ST64985High-qualityHigh-quality91.170AAI-based (high-confidence) BrussowvirusBrussowvirus bv2972The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperatecro orf_27
KY705286Streptococcus phage P98533446939.726StreptococcusGroup I BrussowvirusBrussowvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilus ST64985High-qualityHigh-quality90.100AAI-based (high-confidence) BrussowvirusBrussowvirus P9853The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperatecro orf_28
KY705287Streptococcus phage P98543697938.938StreptococcusGroup I MoineauvirusMoineauvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilus ST64985High-qualityHigh-quality100.000AAI-based (high-confidence) MoineauvirusMoineauvirus P9854The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateantirepressor orf_27;cro orf_28
KY705288Streptococcus phage P99013521138.866StreptococcusGroup I MoineauvirusMoineauvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilus ST62990High-qualityHigh-quality95.150AAI-based (high-confidence) MoineauvirusMoineauvirus P9901Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_24;cro orf_25
KY705289Streptococcus phage P99023553538.866StreptococcusGroup I MoineauvirusMoineauvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilus ST62990High-qualityHigh-quality96.260AAI-based (high-confidence) MoineauvirusMoineauvirus P9902Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_26;cro orf_27
KY705290Streptococcus phage P99033525638.725StreptococcusGroup I MoineauvirusMoineauvirusUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus thermophilus ST62990High-qualityHigh-quality95.540AAI-based (high-confidence) MoineauvirusMoineauvirus P9903Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_27;cro orf_28
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