Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
KU884562Pseudomonas phage PaMx354373345.044PseudomonasGroup I JamesmcgillvirusJamesmcgillvirusUnclassifiedFredfastierviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosaHigh-qualityHigh-quality99.890AAI-based (high-confidence) JamesmcgillvirusJamesmcgillvirus PaMx41Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KU884563Pseudomonas phage PaMx414349045.215PseudomonasGroup I JamesmcgillvirusJamesmcgillvirusUnclassifiedFredfastierviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosaHigh-qualityHigh-quality99.330AAI-based (high-confidence) JamesmcgillvirusJamesmcgillvirus PaMx41Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KU884564Pseudomonas phage PaMx434322345.335PseudomonasGroup I JamesmcgillvirusJamesmcgillvirusUnclassifiedFredfastierviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosaHigh-qualityHigh-quality98.720AAI-based (high-confidence) JamesmcgillvirusJamesmcgillvirus PaMx41Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KU884565Pseudomonas phage PaMx464326645.243PseudomonasGroup I JamesmcgillvirusJamesmcgillvirusUnclassifiedFredfastierviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosaHigh-qualityHigh-quality98.820AAI-based (high-confidence) JamesmcgillvirusJamesmcgillvirus PaMx41Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KU885988Dinoroseobacter phage DS-1410Ws-067646650.005DinoroseobacterGroup I SanyabayvirusSanyabayvirusRhodovirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Dinoroseobacter shibae DFL12High-qualityHigh-quality100.000AAI-based (high-confidence) SanyabayvirusSanyabayvirus DS1410Ws06Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KU885989Roseobacter phage RD-1410W1-017267449.527RoseobacterGroup I AoqinvirusAoqinvirusRhodovirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Roseobacter denitrificans OCh114CompleteHigh-quality100.000DTR (high-confidence) AoqinvirusAoqinvirus RD1410W101Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KU885990Roseobacter phage RD-1410Ws-077629850.008RoseobacterGroup I SanyabayvirusSanyabayvirusRhodovirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Roseobacter denitrificans OCh114High-qualityHigh-quality100.000AAI-based (high-confidence) SanyabayvirusSanyabayvirus DS1410Ws06Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KU886222Erwinia phage vB_EamM_Special G27322449.791ErwiniaGroup I AgricanvirusAgricanvirusUnclassifiedChimalliviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Erwinia amylovoraHigh-qualityHigh-quality98.630AAI-based (high-confidence) AgricanvirusAgricanvirus specialGCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KU886223Erwinia phage vB_EamM_Simmy5027108849.855ErwiniaGroup I AgricanvirusAgricanvirusUnclassifiedChimalliviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Erwinia amylovoraHigh-qualityHigh-quality97.860AAI-based (high-confidence) AgricanvirusAgricanvirus simmy50Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KU886224Erwinia phage vB_EamM_RAY27118249.872ErwiniaGroup I AgricanvirusAgricanvirusUnclassifiedChimalliviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Erwinia amylovoraHigh-qualityHigh-quality97.890AAI-based (high-confidence) AgricanvirusAgricanvirus rayCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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