Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

Clear
Choose fields for download

36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
KT001914Caulobacter phage Seuss8513861.403CaulobacterGroup I SeussvirusSeussvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Caulobacter crescentusCompleteHigh-quality100.000DTR (high-confidence) SeussvirusSeussvirus seussCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KT001915Citrobacter phage Merlin17273338.763CitrobacterGroup I MoonvirusMoonvirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Citrobacter freundiiHigh-qualityHigh-quality100.000AAI-based (high-confidence) MoonvirusMoonvirus merlinCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KT001916Citrobacter phage Michonne9000038.849CitrobacterGroup I MooglevirusMooglevirusOunavirinaeAndersonviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Citrobacter freundiiHigh-qualityHigh-quality100.000AAI-based (high-confidence) MooglevirusMooglevirus mordinThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
KT001917Escherichia phage Murica13539143.614EscherichiaGroup I VequintavirusVequintavirusVequintavirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliHigh-qualityHigh-quality96.520AAI-based (high-confidence) VequintavirusVequintavirus muricaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KT001918Klebsiella phage Matisse17608141.774KlebsiellaGroup I SlopekvirusSlopekvirusUnclassifiedStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality98.840AAI-based (high-confidence) SlopekvirusSlopekvirus matisseCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KT001919Klebsiella phage Miro17605541.779KlebsiellaGroup I SlopekvirusSlopekvirusUnclassifiedStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality98.820AAI-based (high-confidence) SlopekvirusSlopekvirus matisseCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KT001920Klebsiella phage Sushi4875450.769KlebsiellaGroup I WebervirusWebervirusUnclassifiedDrexlerviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality98.410AAI-based (high-confidence) WebervirusWebervirus sushiCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KT004677Mycobacterium phage UnionJack4915859.982MycobacteriumGroup I BenedictvirusBenedictvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterum smegmatis mc2 155High-qualityHigh-quality97.330AAI-based (high-confidence) BenedictvirusBenedictvirus unionjackThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_27;immunity orf_67
KT008108Yersinia phage phiYe-F103921050.699YersiniaGroup I TeetrevirusTeetrevirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Yersinia enterocoliticaCompleteHigh-quality100.000DTR (high-confidence) TeetrevirusTeetrevirus YeF10Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KT020852Mycobacterium phage NoSleep7465562.983MycobacteriumGroup I KostyavirusKostyavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality98.060AAI-based (high-confidence) KostyavirusKostyavirus CJW1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_53;immunity orf_56
Previous Page 337 of 3635 Next