Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
KJ133700Brucella phage 544_194114248.179BrucellaGroup I PerisivirusPerisivirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Brucella abortus S19High-qualityHigh-quality100.000AAI-based (high-confidence) PerisivirusPerisivirus TbCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KJ133701Brucella phage 544_1414114248.172BrucellaGroup I PerisivirusPerisivirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Brucella abortus 141High-qualityHigh-quality100.000AAI-based (high-confidence) PerisivirusPerisivirus TbCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KJ133702Brucella phage 1066_194114348.169BrucellaGroup I PerisivirusPerisivirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Brucella abortus S19High-qualityHigh-quality100.000AAI-based (high-confidence) PerisivirusPerisivirus TbCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KJ133703Brucella phage 1066_1414114348.171BrucellaGroup I PerisivirusPerisivirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria brucella abortus 141High-qualityHigh-quality100.000AAI-based (high-confidence) PerisivirusPerisivirus TbCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KJ133704Brucella phage Tbilisi4114248.167BrucellaGroup I PerisivirusPerisivirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Brucella abortus S19High-qualityHigh-quality100.000AAI-based (high-confidence) PerisivirusPerisivirus TbCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KJ133705Brucella phage Tb_1414114248.172BrucellaGroup I PerisivirusPerisivirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Brucella abortus 141High-qualityHigh-quality100.000AAI-based (high-confidence) PerisivirusPerisivirus TbCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KJ133706Brucella phage V_194114348.173BrucellaGroup I PerisivirusPerisivirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria brucella abortus S19High-qualityHigh-quality100.000AAI-based (high-confidence) PerisivirusPerisivirus TbCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KJ133707Brucella phage V_1414114248.167BrucellaGroup I PerisivirusPerisivirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria brucella abortus 141High-qualityHigh-quality100.000AAI-based (high-confidence) PerisivirusPerisivirus TbCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KJ135004Escherichia phage Bp47258342.883EscherichiaGroup I GamaleyavirusGamaleyavirusEnquatrovirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliCompleteHigh-quality100.000DTR (high-confidence) GamaleyavirusGamaleyavirus Bp4Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KJ140076Staphylococcus phage DW24194135.977StaphylococcusGroup I PhietavirusPhietavirusAzeredovirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureusHigh-qualityHigh-quality98.230AAI-based (high-confidence) PhietavirusPhietavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_1;cro orf_6;antirepressor orf_7;integrase orf_31
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