INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OP503979	Paenibacillus phage Lena	44420	42.969	Paenibacillus	Group I	Gochnauervirinae	Unclassified	Gochnauervirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae 2017	Medium-quality	Genome-fragment	76.400	HMM-based (lower-bound)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_30;antirepressor orf_34
OP503980	Paenibacillus phage Logan	44419	42.988	Paenibacillus	Group I	Gochnauervirinae	Unclassified	Gochnauervirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae 2017	Medium-quality	Genome-fragment	76.400	HMM-based (lower-bound)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_30;antirepressor orf_34
OP503981	Paenibacillus phage NHScienceFair	44419	42.984	Paenibacillus	Group I	Gochnauervirinae	Unclassified	Gochnauervirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae F1A	Medium-quality	Genome-fragment	76.400	HMM-based (lower-bound)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_30;antirepressor orf_34
OP503982	Paenibacillus phage Ollie	44420	42.981	Paenibacillus	Group I	Gochnauervirinae	Unclassified	Gochnauervirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae 2017	Medium-quality	Genome-fragment	76.400	HMM-based (lower-bound)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_30;antirepressor orf_35
OP503983	Paenibacillus phage Rae2Bee1	44420	42.969	Paenibacillus	Group I	Gochnauervirinae	Unclassified	Gochnauervirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae TP	Medium-quality	Genome-fragment	76.400	HMM-based (lower-bound)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_30;antirepressor orf_34
OP503984	Paenibacillus phage Rosalind	43556	43.002	Paenibacillus	Group I	Gochnauervirinae	Unclassified	Gochnauervirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae F1A	Medium-quality	Genome-fragment	75.510	HMM-based (lower-bound)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_30;antirepressor orf_34
OP503985	Paenibacillus phage Ted	44419	42.993	Paenibacillus	Group I	Gochnauervirinae	Unclassified	Gochnauervirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae 2017	Medium-quality	Genome-fragment	76.400	HMM-based (lower-bound)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_30;antirepressor orf_34
OP503986	Paenibacillus phage TonyLawson77	44420	42.963	Paenibacillus	Group I	Gochnauervirinae	Unclassified	Gochnauervirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae F1A	Medium-quality	Genome-fragment	76.400	HMM-based (lower-bound)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_30;antirepressor orf_34
OP503987	Paenibacillus phage UtuhinaGold_Zacery	44420	42.972	Paenibacillus	Group I	Gochnauervirinae	Unclassified	Gochnauervirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae 2017	Medium-quality	Genome-fragment	76.400	HMM-based (lower-bound)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_30;antirepressor orf_34
OP503988	Paenibacillus phage WildCape	44430	42.982	Paenibacillus	Group I	Gochnauervirinae	Unclassified	Gochnauervirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae F1A	Medium-quality	Genome-fragment	76.420	HMM-based (lower-bound)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_30;antirepressor orf_34